Non-Coding RNA Search

Pla1-C0000023_G03

Sequence:


               
               GGCCGGGAGCAGGGTCTGGGGAGGAAAGAGGTCAGGTCTCAGAAAAATCTCATGACTCGG
CTCTAGGAGCTTAATGACAATCACTAGCGCGAGCGCTTGGAGTACGGAGCGGGAATCTCA
TAGCTCTGTTGCCCATCTCAAGACCTAAGAACAAGAACAATTATGAAGTTTAGCCAAATC
TTGCATAGAAGTGGTTAGAATTTATTGCACATTGGAACAAAAATATATTTTTGTTGTCGT
TTTGGAAAAGACCATTAGCAATAAAAAATTTTTTGTCTGTCTGTCTGGTTTGGGGATGTA
CATTGGCTGACAGCGTCTAAGCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCCGGGAGCAGGGTCTGGGGAGGAAAGAGGTCAGGTCTCAGAAAAATCTCATGACTCGG
CTCTAGGAGCTTAATGACAATCACTAGCGCGAGCGCTTGGAGTACGGAGCGGGAATCTCA
TAGCTCTGTTGCCCATCTCAAGACCTAAGAACAAGAACAATTATGAAGTTTAGCCAAATC
TTGCATAGAAGTGGTTAGAATTTATTGCACATTGGAACAAAAATATATTTTTGTTGTCGT
TTTGGAAAAGACCATTAGCAATAAAAAATTTTTTGTCTGTCTGTCTGGTTTGGGGATGTA
CATTGGCTGACAGCGTCTAAGCTC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               165-281, + strand, RNAz p=0.891164

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               165-281, + strand, RNAz p=0.891164

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-320, gnl|bosTau2|chr5 (21430678-21430363)
               

               
               7-320, gnl|Hg17|chr12 (50490192-50489888)
               

               
               7-320, gnl|Mm7|chr15 (101028551-101028280)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-320, gnl|bosTau2|chr5 (21430678-21430363)
               

               
               7-320, gnl|Hg17|chr12 (50490192-50489888)
               

               
               7-320, gnl|Mm7|chr15 (101028551-101028280)

	7-320, gnl\|bosTau2\|chr5 (21430678-21430363)
	7-320, gnl\|Hg17\|chr12 (50490192-50489888)
	7-320, gnl\|Mm7\|chr15 (101028551-101028280)