Non-Coding RNA Search

Pla1-C0000023_I09

Sequence:


               
               CTGAGATGGGGCAGAGGATAGGCAAAGAAACTGCGTATCTCCCCAGGCAGCCTGGCTCTT
AACCTCCCTGCCCAGTGAGCAGGTAGGCTCCAGGGTGGCCTAGCCTCTGGAGTTTTTGCC
TCTCTAAACAGCAAACTTCCAGCATTTGCTTCTCCAGGTGTGTGTCAGGGACAGCATGGG
GGCCGTTGCCCCAGAAGGAGGGCTCCTCTCTGTGTTCCAGTTCTGTTCTCTATGCCCATG
GGGGCATAGGTGTGTCCCTAAAGGGTCACTGATCACTTCCTGGCCTCAGGATCATCAATG
CAGAGAAATCTGAGTTCAATGAGGATCAGGCAGCTTGTGGGAAGCTATGCATCCGGAGAT
GTGGGTTTGGGGTTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGAGATGGGGCAGAGGATAGGCAAAGAAACTGCGTATCTCCCCAGGCAGCCTGGCTCTT
AACCTCCCTGCCCAGTGAGCAGGTAGGCTCCAGGGTGGCCTAGCCTCTGGAGTTTTTGCC
TCTCTAAACAGCAAACTTCCAGCATTTGCTTCTCCAGGTGTGTGTCAGGGACAGCATGGG
GGCCGTTGCCCCAGAAGGAGGGCTCCTCTCTGTGTTCCAGTTCTGTTCTCTATGCCCATG
GGGGCATAGGTGTGTCCCTAAAGGGTCACTGATCACTTCCTGGCCTCAGGATCATCAATG
CAGAGAAATCTGAGTTCAATGAGGATCAGGCAGCTTGTGGGAAGCTATGCATCCGGAGAT
GTGGGTTTGGGGTTGA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               210-359, + strand, RNAz p=0.939858

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               210-359, + strand, RNAz p=0.939858

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of BC009644, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of BC009644, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-376, gnl|bosTau2|chr22 (36819561-36819948)
               

               
               1-376, gnl|Hg17|chr3 (52255467-52255837)
               

               
               1-376, gnl|Mm7|chr9 (105928112-105927586)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-376, gnl|bosTau2|chr22 (36819561-36819948)
               

               
               1-376, gnl|Hg17|chr3 (52255467-52255837)
               

               
               1-376, gnl|Mm7|chr9 (105928112-105927586)

	1-376, gnl\|bosTau2\|chr22 (36819561-36819948)
	1-376, gnl\|Hg17\|chr3 (52255467-52255837)
	1-376, gnl\|Mm7\|chr9 (105928112-105927586)