Pla1-C0000027_K16
|
GTGGGTTCAGAGAAATGCTGAAGAGAGAGAGAGGTACTTTGAAGAACTTTTTAAACTGCT
CAGGTTGTCCCAGATGAAACCTACTTACCTTACTCGTCATGTCAAACCAGAGAGGCTGGT
GGCCAATAATGAGGTGTGCGTCAAGTTAGTGGCCGATGCGGTGGAGAGGCATGCTCTGAG
GGCCGAGAATATCCAGTCTGGCACATTCCAGCATCCCGCTTCTCACGTCTCATTGTTACC
TCGCTATGGACAAAACATGGACGTGATCATGGTCATTGGCGGCGTGTCGGAAGGAGGGGA
CTACCTGAGTGAGTGTGTGGGGTATTTTGTTGATGAGGACAGATGGGTAAACTTACCCCA
TATTCATAATCACCTTGATGGACATGCGGTTACAGTAACAGAATCCTACGTGTATGTTGC
TGGGTCAATGGAACCAGGTTTTGCTAAAACTGTGGAAAGGTATAACCCAAATTTGAATAC
ATGGGAACATGTTTGT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GTGGGTTCAGAGAAATGCTGAAGAGAGAGAGAGGTACTTTGAAGAACTTTTTAAACTGCT
CAGGTTGTCCCAGATGAAACCTACTTACCTTACTCGTCATGTCAAACCAGAGAGGCTGGT
GGCCAATAATGAGGTGTGCGTCAAGTTAGTGGCCGATGCGGTGGAGAGGCATGCTCTGAG
GGCCGAGAATATCCAGTCTGGCACATTCCAGCATCCCGCTTCTCACGTCTCATTGTTACC
TCGCTATGGACAAAACATGGACGTGATCATGGTCATTGGCGGCGTGTCGGAAGGAGGGGA
CTACCTGAGTGAGTGTGTGGGGTATTTTGTTGATGAGGACAGATGGGTAAACTTACCCCA
TATTCATAATCACCTTGATGGACATGCGGTTACAGTAACAGAATCCTACGTGTATGTTGC
TGGGTCAATGGAACCAGGTTTTGCTAAAACTGTGGAAAGGTATAACCCAAATTTGAATAC
ATGGGAACATGTTTGT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
214-299, + strand, RNAmicro p=0.91101 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
214-299, + strand, RNAmicro p=0.91101 |
|
1-496, gnl|bosTau2|chr23 (115367-115862) |
|
1-496, gnl|canFam2|chr9 (24298711-24298179) |
|
1-496, gnl|danRer3|chr12 (16382591-16382056) |
|
1-496, gnl|dasNov1|scaffold_2391 (82682-82164) |
|
1-496, gnl|echTel1|scaffold_312412 (44952-45452) |
|
1-496, gnl|fr1|chrUn (96658857-96659392) |
|
1-496, gnl|galGal2|chr27_random (467764-467232) |
|
1-496, gnl|hg17|chr17 (37264282-37264814) |
|
1-496, gnl|Hg17|chr17 (37264829-37264334) |
|
1-496, gnl|loxAfr1|scaffold_90240 (4101-4633) |
|
1-496, gnl|mm7|chr11 (100572667-100573199) |
|
1-496, gnl|Mm7|chr11 (100573214-100572719) |
|
1-496, gnl|monDom2|scaffold_18 (52132604-52133136) |
|
1-496, gnl|oryCun1|scaffold_204030 (975-442) |
|
1-496, gnl|panTro1|chr19 (40464510-40465042) |
|
1-496, gnl|rheMac2|chr16 (51953553-51954085) |
|
1-496, gnl|rn3|chr10 (89422769-89423301) |
|
1-496, gnl|tetNig1|chrUn_random (130674480-130673945) |
|
1-496, gnl|xenTro1|scaffold_394 (779920-780452) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-496, gnl|bosTau2|chr23 (115367-115862) |
|
1-496, gnl|canFam2|chr9 (24298711-24298179) |
|
1-496, gnl|danRer3|chr12 (16382591-16382056) |
|
1-496, gnl|dasNov1|scaffold_2391 (82682-82164) |
|
1-496, gnl|echTel1|scaffold_312412 (44952-45452) |
|
1-496, gnl|fr1|chrUn (96658857-96659392) |
|
1-496, gnl|galGal2|chr27_random (467764-467232) |
|
1-496, gnl|hg17|chr17 (37264282-37264814) |
|
1-496, gnl|Hg17|chr17 (37264829-37264334) |
|
1-496, gnl|loxAfr1|scaffold_90240 (4101-4633) |
|
1-496, gnl|mm7|chr11 (100572667-100573199) |
|
1-496, gnl|Mm7|chr11 (100573214-100572719) |
|
1-496, gnl|monDom2|scaffold_18 (52132604-52133136) |
|
1-496, gnl|oryCun1|scaffold_204030 (975-442) |
|
1-496, gnl|panTro1|chr19 (40464510-40465042) |
|
1-496, gnl|rheMac2|chr16 (51953553-51954085) |
|
1-496, gnl|rn3|chr10 (89422769-89423301) |
|
1-496, gnl|tetNig1|chrUn_random (130674480-130673945) |
|
1-496, gnl|xenTro1|scaffold_394 (779920-780452) |
