Non-Coding RNA Search

Pla1-C0000028_E23

Sequence:


               
               TTCCACTGAATATATGTGCCATATCTTTCTTAACCATTCCTCTCTCAATGAACATTTAAG
ATACTTCTGTGTCTTGGCTACTGTAAATAGCACTGCCAGGAAAGTTTTTTATTTTTTATT
TATTTTTTTAATTTTTTTTGCCATATCCATggcatgtagaagttcccaggctgggaatgg
aacccaagccagagcagtgacaacaccacatccttaaccattaggccaccagggaactct
gaggaaagtttaaataaaatcattttgggaagttcccgttgtggctcagcagaaacaaaa
ctgactagtatccatgaggatgcggatttgatcctgggcctcgctccttggcttaaggat
cctatgttgccatgagctatggtgtagattgcagacacagctcagatcccacattgctgg
ggcATAGGTCAGCAGCTGTAACTCCAATTTGACGCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCCACTGAATATATGTGCCATATCTTTCTTAACCATTCCTCTCTCAATGAACATTTAAG
ATACTTCTGTGTCTTGGCTACTGTAAATAGCACTGCCAGGAAAGTTTTTTATTTTTTATT
TATTTTTTTAATTTTTTTTGCCATATCCATggcatgtagaagttcccaggctgggaatgg
aacccaagccagagcagtgacaacaccacatccttaaccattaggccaccagggaactct
gaggaaagtttaaataaaatcattttgggaagttcccgttgtggctcagcagaaacaaaa
ctgactagtatccatgaggatgcggatttgatcctgggcctcgctccttggcttaaggat
cctatgttgccatgagctatggtgtagattgcagacacagctcagatcccacattgctgg
ggcATAGGTCAGCAGCTGTAACTCCAATTTGACGCCT

ncRNA annotation: 1 entry(ies)

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               235-163, tRNA Pseudo, RaveNnA Score=29.38

ncRNA annotation: 1 entry(ies)

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PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               235-163, tRNA Pseudo, RaveNnA Score=29.38