Pla1-C0000028_O24
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAAACAGCCTTAGATCCAGATCACCCACGAGTGGCTCAGTCCCTGCATCAGCTAGCAAGT GTGTACGTACAGTGGAAGAAGTTCGGCAATGCAGAACAACTGTTTAAACAGGCGTTGGAA ATCTCAGAAAATGCCTATGGTGTGGACCACCCACATATTGCTCGTGAACTTGAGGCACTT GCAACTTTGTACCAGAAACAAAATAAATATGAACAAGCTGAACATTTTAGGAAAAAATCT TTTAAAATTCGTCAGAAAGCTACAAGGAGAAAAGGCAACTTGTATGGATTTGCCCTTCTG CGTAGACGGGCCCTGCAGTTAGAAGAGCTCACGTTAGGTAAGGACACACCTGACAATGCT CGGACCCTCAATGAACTGGGCGTGCTCTACTATCTTCAGAACAACCTGGAAACAGCTGAA CAGTTTCTGAAGCGGTCCTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAAACAGCCTTAGATCCAGATCACCCACGAGTGGCTCAGTCCCTGCATCAGCTAGCAAGT GTGTACGTACAGTGGAAGAAGTTCGGCAATGCAGAACAACTGTTTAAACAGGCGTTGGAA ATCTCAGAAAATGCCTATGGTGTGGACCACCCACATATTGCTCGTGAACTTGAGGCACTT GCAACTTTGTACCAGAAACAAAATAAATATGAACAAGCTGAACATTTTAGGAAAAAATCT TTTAAAATTCGTCAGAAAGCTACAAGGAGAAAAGGCAACTTGTATGGATTTGCCCTTCTG CGTAGACGGGCCCTGCAGTTAGAAGAGCTCACGTTAGGTAAGGACACACCTGACAATGCT CGGACCCTCAATGAACTGGGCGTGCTCTACTATCTTCAGAACAACCTGGAAACAGCTGAA CAGTTTCTGAAGCGGTCCTT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 282-410, + strand, RNAz p=0.519549 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 282-410, + strand, RNAz p=0.519549 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of AB082531, + |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 1-212, gnl|bosTau2|chr9 (59515325-59515536) | |
| 1-212, gnl|canFam2|chr23 (32720801-32721062) | |
| 1-212, gnl|danRer3|chr24 (6329247-6328967) | |
| 1-212, gnl|dasNov1|scaffold_1672 (38571-38831) | |
| 1-212, gnl|echTel1|scaffold_312325 (50832-51090) | |
| 1-212, gnl|fr1|chrUn (151561225-151561482) | |
| 1-212, gnl|galGal2|chr2 (41444535-41444794) | |
| 1-212, gnl|hg17|chr3 (133890181-133890445) | |
| 1-212, gnl|Hg17|chr3 (133890397-133890186) | |
| 1-212, gnl|loxAfr1|scaffold_34679 (2210-1951) | |
| 1-212, gnl|mm7|chr9 (103752429-103752168) | |
| 1-212, gnl|Mm7|chr9 (103752214-103752425) | |
| 1-212, gnl|monDom2|scaffold_7 (68255518-68255252) | |
| 1-212, gnl|oryCun1|scaffold_190877 (6233-6494) | |
| 1-212, gnl|panTro1|chr2 (136029328-136029592) | |
| 1-212, gnl|rheMac2|chr2 (155003879-155003615) | |
| 1-212, gnl|rn3|chr8 (109118476-109118215) | |
| 1-212, gnl|tetNig1|chr6 (3776465-3776717) | |
| 1-212, gnl|xenTro1|scaffold_436 (753187-752923) | |
| 282-410, gnl|bosTau2|chr9 (59518086-59518214) | |
| 282-410, gnl|canFam2|chr23 (32718587-32718736) | |
| 282-410, gnl|danRer3|chr24 (6332806-6332666) | |
| 282-410, gnl|dasNov1|scaffold_1672 (36798-36953) | |
| 282-410, gnl|echTel1|scaffold_312325 (48556-48703) | |
| 282-410, gnl|fr1|chrUn (151560882-151561041) | |
| 282-410, gnl|galGal2|chr2 (41443544-41443687) | |
| 282-410, gnl|hg17|chr3 (133887796-133887953) | |
| 282-410, gnl|Hg17|chr3 (133887930-133887802) | |
| 282-410, gnl|loxAfr1|scaffold_34679 (4151-3995) | |
| 282-410, gnl|mm7|chr9 (103754709-103754559) | |
| 282-410, gnl|Mm7|chr9 (103754573-103754701) | |
| 282-410, gnl|monDom2|scaffold_7 (68257495-68257345) | |
| 282-410, gnl|oryCun1|scaffold_190877 (3462-3615) | |
| 282-410, gnl|panTro1|chr2 (136026945-136027102) | |
| 282-410, gnl|rheMac2|chr2 (155005846-155005689) | |
| 282-410, gnl|rn3|chr8 (109121002-109120852) | |
| 282-410, gnl|tetNig1|chr6 (3776113-3776257) | |
| 282-410, gnl|xenTro1|scaffold_436 (754967-754815) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-212, gnl|bosTau2|chr9 (59515325-59515536) | |
| 1-212, gnl|canFam2|chr23 (32720801-32721062) | |
| 1-212, gnl|danRer3|chr24 (6329247-6328967) | |
| 1-212, gnl|dasNov1|scaffold_1672 (38571-38831) | |
| 1-212, gnl|echTel1|scaffold_312325 (50832-51090) | |
| 1-212, gnl|fr1|chrUn (151561225-151561482) | |
| 1-212, gnl|galGal2|chr2 (41444535-41444794) | |
| 1-212, gnl|hg17|chr3 (133890181-133890445) | |
| 1-212, gnl|Hg17|chr3 (133890397-133890186) | |
| 1-212, gnl|loxAfr1|scaffold_34679 (2210-1951) | |
| 1-212, gnl|mm7|chr9 (103752429-103752168) | |
| 1-212, gnl|Mm7|chr9 (103752214-103752425) | |
| 1-212, gnl|monDom2|scaffold_7 (68255518-68255252) | |
| 1-212, gnl|oryCun1|scaffold_190877 (6233-6494) | |
| 1-212, gnl|panTro1|chr2 (136029328-136029592) | |
| 1-212, gnl|rheMac2|chr2 (155003879-155003615) | |
| 1-212, gnl|rn3|chr8 (109118476-109118215) | |
| 1-212, gnl|tetNig1|chr6 (3776465-3776717) | |
| 1-212, gnl|xenTro1|scaffold_436 (753187-752923) | |
| 282-410, gnl|bosTau2|chr9 (59518086-59518214) | |
| 282-410, gnl|canFam2|chr23 (32718587-32718736) | |
| 282-410, gnl|danRer3|chr24 (6332806-6332666) | |
| 282-410, gnl|dasNov1|scaffold_1672 (36798-36953) | |
| 282-410, gnl|echTel1|scaffold_312325 (48556-48703) | |
| 282-410, gnl|fr1|chrUn (151560882-151561041) | |
| 282-410, gnl|galGal2|chr2 (41443544-41443687) | |
| 282-410, gnl|hg17|chr3 (133887796-133887953) | |
| 282-410, gnl|Hg17|chr3 (133887930-133887802) | |
| 282-410, gnl|loxAfr1|scaffold_34679 (4151-3995) | |
| 282-410, gnl|mm7|chr9 (103754709-103754559) | |
| 282-410, gnl|Mm7|chr9 (103754573-103754701) | |
| 282-410, gnl|monDom2|scaffold_7 (68257495-68257345) | |
| 282-410, gnl|oryCun1|scaffold_190877 (3462-3615) | |
| 282-410, gnl|panTro1|chr2 (136026945-136027102) | |
| 282-410, gnl|rheMac2|chr2 (155005846-155005689) | |
| 282-410, gnl|rn3|chr8 (109121002-109120852) | |
| 282-410, gnl|tetNig1|chr6 (3776113-3776257) | |
| 282-410, gnl|xenTro1|scaffold_436 (754967-754815) |