Non-Coding RNA Search

Pla1-C0000030_B09

Sequence:


               
               TTGCTCAGAAGTCTTTTTTGCAAATCATCTTATTTATCTGCACTTTGCTCCCCAAGATGA
AGATTATAAGAACAAATGACACAGCAGCTCTGCTCTGCCTCTAGCTGTCCCTCTACTCAT
TTAATTAGAAAAGGGAAACCATCCAACCGAAAACTAATCACGAGGAACTAATTAAAAGTC
CACTGCACTTCCTGCCATTCTTTCCCTCCAACCAGGGGAGGAAGGGTTTCTAATTATTAG
CAATACATGAGCACAGAAGAAATAAATTTTTATCTCCTTTATCTTGGACGTAATGGGTTC
ACGCTCCCAGATCTCGGAGGATCATGTACCTGTGTCCACAACAGGTGACAAGCTTGAACC
AAACTCCGAAAGAAAAAACGCTAAACAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGCTCAGAAGTCTTTTTTGCAAATCATCTTATTTATCTGCACTTTGCTCCCCAAGATGA
AGATTATAAGAACAAATGACACAGCAGCTCTGCTCTGCCTCTAGCTGTCCCTCTACTCAT
TTAATTAGAAAAGGGAAACCATCCAACCGAAAACTAATCACGAGGAACTAATTAAAAGTC
CACTGCACTTCCTGCCATTCTTTCCCTCCAACCAGGGGAGGAAGGGTTTCTAATTATTAG
CAATACATGAGCACAGAAGAAATAAATTTTTATCTCCTTTATCTTGGACGTAATGGGTTC
ACGCTCCCAGATCTCGGAGGATCATGTACCTGTGTCCACAACAGGTGACAAGCTTGAACC
AAACTCCGAAAGAAAAAACGCTAAACAT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               264-378, + strand, RNAz p=0.905342

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               264-378, + strand, RNAz p=0.905342

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               17-378, gnl|bosTau2|chr23 (30112384-30112732)
               

               
               17-378, gnl|Hg17|chr6 (17873630-17873276)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               17-378, gnl|bosTau2|chr23 (30112384-30112732)
               

               
               17-378, gnl|Hg17|chr6 (17873630-17873276)

	17-378, gnl\|bosTau2\|chr23 (30112384-30112732)
	17-378, gnl\|Hg17\|chr6 (17873630-17873276)