Non-Coding RNA Search

Pla1-C0000032_O12

Sequence:


               
               CAGGTCATGATGTTTGGCAGCACCGCCATCGCCCTGGAGCTGCTGAAGCAAGGTGCCAGC
CCCAATGTCCAGGACACCTCCGGTACCAGTCCAGTCCATGACGCAGCCCGCACTGGATTC
CTGGACACCCTGAAGGTCCTAGTGGAGCACGGGGCTGATGTCAACGTGCCTGATGGCACC
GGGGCACTTCCAATCCATCTGGCAGTTCAAGAGGGTCACACTGCTGTGGTCAGCTTTCTG
GCAGCTGAATCTGATCTCCATCGCAGGGACGCCAGGGGTCTCACACCCTTGGAGCTGGCA
CTGCAGAGAGGGGCTCAGGACCTCGTGGACATCCTGCAGGGCCACATGGTGGCCCCGCTG
TGATCTGGGGTCACCCTCTCCAGCAAGAGAACCCCGTGGGGTTATGTATCAGAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGTCATGATGTTTGGCAGCACCGCCATCGCCCTGGAGCTGCTGAAGCAAGGTGCCAGC
CCCAATGTCCAGGACACCTCCGGTACCAGTCCAGTCCATGACGCAGCCCGCACTGGATTC
CTGGACACCCTGAAGGTCCTAGTGGAGCACGGGGCTGATGTCAACGTGCCTGATGGCACC
GGGGCACTTCCAATCCATCTGGCAGTTCAAGAGGGTCACACTGCTGTGGTCAGCTTTCTG
GCAGCTGAATCTGATCTCCATCGCAGGGACGCCAGGGGTCTCACACCCTTGGAGCTGGCA
CTGCAGAGAGGGGCTCAGGACCTCGTGGACATCCTGCAGGGCCACATGGTGGCCCCGCTG
TGATCTGGGGTCACCCTCTCCAGCAAGAGAACCCCGTGGGGTTATGTATCAGAAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|21435975|gb|AAM54045.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|21435975|gb|AAM54045.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               41-160, - strand, RNAz p=0.751737

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               41-160, - strand, RNAz p=0.751737

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-415, gnl|bosTau2|chr7 (10928113-10927699)
               

               
               1-415, gnl|Hg17|chr19 (10539096-10538682)
               

               
               1-415, gnl|Mm7|chr9 (21165891-21165484)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-415, gnl|bosTau2|chr7 (10928113-10927699)
               

               
               1-415, gnl|Hg17|chr19 (10539096-10538682)
               

               
               1-415, gnl|Mm7|chr9 (21165891-21165484)

	1-415, gnl\|bosTau2\|chr7 (10928113-10927699)
	1-415, gnl\|Hg17\|chr19 (10539096-10538682)
	1-415, gnl\|Mm7\|chr9 (21165891-21165484)