Non-Coding RNA Search

Pla1-C0000037_A23

Sequence:


               
               TTATGCTTCTATTCTATCATCTAAAACAAATCATTAAAACTAATTCCTAGCTAATTGTTC
CTTATAATTATGCTCAGAAGTCTGTTTAATGAGTCCTGGCTGCACTTACGTGGCACCATC
GGTATTAGGGGAAATGACTCTCACAAGAGAGGAGGCTTCAAGATTCTTTCTTCGGAAAGC
CCAGCTTTACAAAGGAGAAAAAAAATTTTTTTTATTAATAGCTCAGGTTAAAAATACTCA
TTTAAACAAAAACAAAAGCATTTGTAATGGGAAATTTTATACAAATAGCACATTCGTGAT
AGGTTGTGAAGTATCTCTTGGCAGCTAAATATTTTTGAGGAAGATTGGGTAATGCTGATG
TGTTCCATTCGCAAAACTCTATCTGATATGAAATCCTGTTATTAGTTTGTATGCACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTATGCTTCTATTCTATCATCTAAAACAAATCATTAAAACTAATTCCTAGCTAATTGTTC
CTTATAATTATGCTCAGAAGTCTGTTTAATGAGTCCTGGCTGCACTTACGTGGCACCATC
GGTATTAGGGGAAATGACTCTCACAAGAGAGGAGGCTTCAAGATTCTTTCTTCGGAAAGC
CCAGCTTTACAAAGGAGAAAAAAAATTTTTTTTATTAATAGCTCAGGTTAAAAATACTCA
TTTAAACAAAAACAAAAGCATTTGTAATGGGAAATTTTATACAAATAGCACATTCGTGAT
AGGTTGTGAAGTATCTCTTGGCAGCTAAATATTTTTGAGGAAGATTGGGTAATGCTGATG
TGTTCCATTCGCAAAACTCTATCTGATATGAAATCCTGTTATTAGTTTGTATGCACA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               1-119, - strand, RNAz p=0.657403

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-119, - strand, RNAz p=0.657403

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-417, gnl|bosTau2|chr5 (51480828-51480410)
               

               
               1-417, gnl|Hg17|chr12 (26276014-26276427)
               

               
               1-417, gnl|Mm7|chr6 (146052867-146053261)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-417, gnl|bosTau2|chr5 (51480828-51480410)
               

               
               1-417, gnl|Hg17|chr12 (26276014-26276427)
               

               
               1-417, gnl|Mm7|chr6 (146052867-146053261)

	1-417, gnl\|bosTau2\|chr5 (51480828-51480410)
	1-417, gnl\|Hg17\|chr12 (26276014-26276427)
	1-417, gnl\|Mm7\|chr6 (146052867-146053261)