Pla1-C0000037_I14
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAGCTGCCCCTCCTCCCCAGTCCCTTCCCCGGCGCCCTCTGTGGCTGGCTCTGTGGCCT CCAGCTCCGGCTCCCTGCGCCACCGCAGGCCTCTCATCAGCCCTGCCCGGCTCAACTTGG AGGGGAGGAAGCTGCTGCTGTTCCCGTCTCCCTCTGGGGAGGCCCCCAGCATGCCCAGCA GCCCAGATGAGCACTCGCATCCCAACGGCAGCCTCTGCACTGTCGAGCCACCCCAGGTGC CCCAGAAGCAGCCAGCGCGGGACACGAAGCACACTCTGGACATGAAGTCGGTGCCGGAAA GAGACAGCACCTGCAGCAGTGGTTCCATCAAGAAAGAGGACGACTCGTCCCAGTCATCCT CCTGCGTGGTGGACACCACCACCAGAGGCTGCGCGGAGGAGGCCACCGCCTGGCGAGGTC TGTGCGCCCACGTGCTGTGTGGGAGGAGGGTGGGCAGCGAGCAGGCCCGTCCATC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAGCTGCCCCTCCTCCCCAGTCCCTTCCCCGGCGCCCTCTGTGGCTGGCTCTGTGGCCT CCAGCTCCGGCTCCCTGCGCCACCGCAGGCCTCTCATCAGCCCTGCCCGGCTCAACTTGG AGGGGAGGAAGCTGCTGCTGTTCCCGTCTCCCTCTGGGGAGGCCCCCAGCATGCCCAGCA GCCCAGATGAGCACTCGCATCCCAACGGCAGCCTCTGCACTGTCGAGCCACCCCAGGTGC CCCAGAAGCAGCCAGCGCGGGACACGAAGCACACTCTGGACATGAAGTCGGTGCCGGAAA GAGACAGCACCTGCAGCAGTGGTTCCATCAAGAAAGAGGACGACTCGTCCCAGTCATCCT CCTGCGTGGTGGACACCACCACCAGAGGCTGCGCGGAGGAGGCCACCGCCTGGCGAGGTC TGTGCGCCCACGTGCTGTGTGGGAGGAGGGTGGGCAGCGAGCAGGCCCGTCCATC |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 279-397, - strand, RNAz p=0.655943 | |
| 298-450, - strand, RNAz p=0.893537 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 279-397, - strand, RNAz p=0.655943 | |
| 298-450, - strand, RNAz p=0.893537 |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 3-274, gnl|bosTau2|chr16 (30786877-30787148) | |
| 3-274, gnl|canFam2|chr5 (65847078-65847346) | |
| 3-274, gnl|danRer3|chrUn (108493898-108494163) | |
| 3-274, gnl|dasNov1|scaffold_208488 (86-339) | |
| 3-274, gnl|fr1|chrUn (45031311-45031051) | |
| 3-274, gnl|galGal2|chr21 (3293388-3293653) | |
| 3-274, gnl|hg17|chr1 (9604826-9605094) | |
| 3-274, gnl|Hg17|chr1 (9604853-9605124) | |
| 3-274, gnl|mm7|chr4 (148708492-148708230) | |
| 3-274, gnl|Mm7|chr4 (148708463-148708198) | |
| 3-274, gnl|monDom2|scaffold_177 (1162536-1162265) | |
| 3-274, gnl|oryCun1|scaffold_147830 (4369-4637) | |
| 3-274, gnl|panTro1|chr1 (9618151-9618419) | |
| 3-274, gnl|rheMac2|chr1 (12659185-12659453) | |
| 3-274, gnl|rn3|chr5 (166821688-166821426) | |
| 3-274, gnl|tetNig1|chr9 (2567975-2567713) | |
| 279-450, gnl|bosTau2|chr16 (30787906-30788073) | |
| 279-450, gnl|canFam2|chr5 (65848177-65848343) | |
| 279-450, gnl|dasNov1|scaffold_208488 (964-1107) | |
| 279-450, gnl|echTel1|scaffold_285403 (43779-43921) | |
| 279-450, gnl|galGal2|chr21 (3294123-3294277) | |
| 279-450, gnl|hg17|chr1 (9606061-9606227) | |
| 279-450, gnl|Hg17|chr1 (9606076-9606246) | |
| 279-450, gnl|loxAfr1|scaffold_86339 (3613-3791) | |
| 279-450, gnl|mm7|chr4 (148707717-148707551) | |
| 279-450, gnl|Mm7|chr4 (148707700-148707508) | |
| 279-450, gnl|monDom2|scaffold_177 (1161260-1161094) | |
| 279-450, gnl|panTro1|chr1 (9619391-9619557) | |
| 279-450, gnl|rheMac2|chr1 (12660414-12660580) | |
| 279-450, gnl|rn3|chr5 (166820748-166820582) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-274, gnl|bosTau2|chr16 (30786877-30787148) | |
| 3-274, gnl|canFam2|chr5 (65847078-65847346) | |
| 3-274, gnl|danRer3|chrUn (108493898-108494163) | |
| 3-274, gnl|dasNov1|scaffold_208488 (86-339) | |
| 3-274, gnl|fr1|chrUn (45031311-45031051) | |
| 3-274, gnl|galGal2|chr21 (3293388-3293653) | |
| 3-274, gnl|hg17|chr1 (9604826-9605094) | |
| 3-274, gnl|Hg17|chr1 (9604853-9605124) | |
| 3-274, gnl|mm7|chr4 (148708492-148708230) | |
| 3-274, gnl|Mm7|chr4 (148708463-148708198) | |
| 3-274, gnl|monDom2|scaffold_177 (1162536-1162265) | |
| 3-274, gnl|oryCun1|scaffold_147830 (4369-4637) | |
| 3-274, gnl|panTro1|chr1 (9618151-9618419) | |
| 3-274, gnl|rheMac2|chr1 (12659185-12659453) | |
| 3-274, gnl|rn3|chr5 (166821688-166821426) | |
| 3-274, gnl|tetNig1|chr9 (2567975-2567713) | |
| 279-450, gnl|bosTau2|chr16 (30787906-30788073) | |
| 279-450, gnl|canFam2|chr5 (65848177-65848343) | |
| 279-450, gnl|dasNov1|scaffold_208488 (964-1107) | |
| 279-450, gnl|echTel1|scaffold_285403 (43779-43921) | |
| 279-450, gnl|galGal2|chr21 (3294123-3294277) | |
| 279-450, gnl|hg17|chr1 (9606061-9606227) | |
| 279-450, gnl|Hg17|chr1 (9606076-9606246) | |
| 279-450, gnl|loxAfr1|scaffold_86339 (3613-3791) | |
| 279-450, gnl|mm7|chr4 (148707717-148707551) | |
| 279-450, gnl|Mm7|chr4 (148707700-148707508) | |
| 279-450, gnl|monDom2|scaffold_177 (1161260-1161094) | |
| 279-450, gnl|panTro1|chr1 (9619391-9619557) | |
| 279-450, gnl|rheMac2|chr1 (12660414-12660580) | |
| 279-450, gnl|rn3|chr5 (166820748-166820582) |