Non-Coding RNA Search

Pla1-C0000037_M15

Sequence:


               
               GCGGCTCGAGAAAACATTTTGGGCTTCATTGCTGCAGACATCAAAGGGACGGGCTCCTGG
ACCCAGCTGTACCTCATCACAGATTATCATGAAAACGGCTCCCTCTATGATTACCTGAAG
TCCACCACCCTGGATACTAAATCCATGCTGAAGTTAGCTTACTCTTCTGTCAGTGGCCTA
TGTCACTTACACACCGAAATCTTCAGTACTCAAGGCAAACCGGCAATTGCCCATCGAGAT
CTGAAAAGTAAGAACATCCTGGTGAAGAAAAATGGAACTTGCTGTATAGCTGACCTGGGT
CTGGCTGTCAAATTTATTAGTGATACAAACGAGGTCGACATACCACCCAACACCCGAGTT
GGCACCAAGCGCTACATGGCTCCAGAAGTGCTGGATGAGAGCTTGAACAGGAATCACTTT
CAGTCCTACATCATGGCCGACATGTACAGCTTTGGACTCATCCTTTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCTCGAGAAAACATTTTGGGCTTCATTGCTGCAGACATCAAAGGGACGGGCTCCTGG
ACCCAGCTGTACCTCATCACAGATTATCATGAAAACGGCTCCCTCTATGATTACCTGAAG
TCCACCACCCTGGATACTAAATCCATGCTGAAGTTAGCTTACTCTTCTGTCAGTGGCCTA
TGTCACTTACACACCGAAATCTTCAGTACTCAAGGCAAACCGGCAATTGCCCATCGAGAT
CTGAAAAGTAAGAACATCCTGGTGAAGAAAAATGGAACTTGCTGTATAGCTGACCTGGGT
CTGGCTGTCAAATTTATTAGTGATACAAACGAGGTCGACATACCACCCAACACCCGAGTT
GGCACCAAGCGCTACATGGCTCCAGAAGTGCTGGATGAGAGCTTGAACAGGAATCACTTT
CAGTCCTACATCATGGCCGACATGTACAGCTTTGGACTCATCCTTTGG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|19881361|gb|AAM00923.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|19881361|gb|AAM00923.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               17-340, gnl|bosTau2|chr6 (12444398-12444720)
               

               
               17-340, gnl|Hg17|chr4 (96409538-96409860)
               

               
               17-340, gnl|Mm7|chr3 (141750494-141750172)
               


               
               22-314, gnl|bosTau2|chr28 (31947519-31947811)
               

               
               22-314, gnl|Hg17|chr10 (88668908-88669200)
               

               
               22-314, gnl|Mm7|chr14 (31856207-31855915)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               17-340, gnl|bosTau2|chr6 (12444398-12444720)
               

               
               17-340, gnl|Hg17|chr4 (96409538-96409860)
               

               
               17-340, gnl|Mm7|chr3 (141750494-141750172)
               


               
               22-314, gnl|bosTau2|chr28 (31947519-31947811)
               

               
               22-314, gnl|Hg17|chr10 (88668908-88669200)
               

               
               22-314, gnl|Mm7|chr14 (31856207-31855915)

	17-340, gnl\|bosTau2\|chr6 (12444398-12444720)
	17-340, gnl\|Hg17\|chr4 (96409538-96409860)
	17-340, gnl\|Mm7\|chr3 (141750494-141750172)

	22-314, gnl\|bosTau2\|chr28 (31947519-31947811)
	22-314, gnl\|Hg17\|chr10 (88668908-88669200)
	22-314, gnl\|Mm7\|chr14 (31856207-31855915)