Non-Coding RNA Search

Pla1-C0000038_E22

Sequence:


               
               CGATGGCGAAGCAGCCTCAACCCTTTGCCCCCTCCCCGCCGCCACCCGTTTGCCCTCTTG
GGGGTTCCGGTCTCAAGTACACGCACAGAGCCTTGAATGTGGTCCTAAGCCAAAGCTGTG
GTTGGAGGTGCTTTTCAATGACTCACGAAGAAGCATTGCCTTTTAATCCTTGATCTTTTT
TTTTTTTTTTTTCTTTTTTTTAATACTGGGTTAAATGATTTGCTCTCCCTGGCCCCAACC
CACGGGTGACCTCCAGCTTGGGTGATCTAAGAGCTTATCCCACTGGCCGAATACTCTGAC
GCCAGGCTGAGTCAGCAGGAAGCCCTTCCTGCACGGGGCCAGGGTACCTGCTGTGAAATT
GCACGCACAGCAGGTACAGGTAACCGGAGGCCACGCCTGCCTCCTCGTCATCACCGGCCT
CAACTCAGGAGCTCTTTATCTGAGTGACATCTTTGTGCAGCACTAAATCTTGTTCCCGGT
GTGGCTGTGATGTCATTGGTGTGGCTTTTCCCCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGATGGCGAAGCAGCCTCAACCCTTTGCCCCCTCCCCGCCGCCACCCGTTTGCCCTCTTG
GGGGTTCCGGTCTCAAGTACACGCACAGAGCCTTGAATGTGGTCCTAAGCCAAAGCTGTG
GTTGGAGGTGCTTTTCAATGACTCACGAAGAAGCATTGCCTTTTAATCCTTGATCTTTTT
TTTTTTTTTTTTCTTTTTTTTAATACTGGGTTAAATGATTTGCTCTCCCTGGCCCCAACC
CACGGGTGACCTCCAGCTTGGGTGATCTAAGAGCTTATCCCACTGGCCGAATACTCTGAC
GCCAGGCTGAGTCAGCAGGAAGCCCTTCCTGCACGGGGCCAGGGTACCTGCTGTGAAATT
GCACGCACAGCAGGTACAGGTAACCGGAGGCCACGCCTGCCTCCTCGTCATCACCGGCCT
CAACTCAGGAGCTCTTTATCTGAGTGACATCTTTGTGCAGCACTAAATCTTGTTCCCGGT
GTGGCTGTGATGTCATTGGTGTGGCTTTTCCCCCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               301-447, - strand, RNAz p=0.986556

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               301-447, - strand, RNAz p=0.986556

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               66-512, gnl|bosTau2|chr25 (32053272-32053734)
               

               
               66-512, gnl|Hg17|chr7 (101436386-101436780)
               

               
               66-512, gnl|Mm7|chr5 (135281737-135281134)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               66-512, gnl|bosTau2|chr25 (32053272-32053734)
               

               
               66-512, gnl|Hg17|chr7 (101436386-101436780)
               

               
               66-512, gnl|Mm7|chr5 (135281737-135281134)

	66-512, gnl\|bosTau2\|chr25 (32053272-32053734)
	66-512, gnl\|Hg17\|chr7 (101436386-101436780)
	66-512, gnl\|Mm7\|chr5 (135281737-135281134)