Pla1-C0000038_H23
|
GCGGCTCGAGAAGAAAACGAGCAAGAATCAGACGGCACAGATACAACTTCTTGTAATGGG
GGATGAGATTGTATGTCTGTGTGCTTGTGTGTTTATGTTCGTGTGCTTGTGTGTTTCCCA
CAATCCTATTCAAACTCCCTTCTCCAGTCATCAAAGTTAAGGGGCTATATACTGGGATAC
TACAATAATTCTAGTCTCTGGGTCTCTGGGTTAATGGTGTTTGCAGACCCCATGATAGTC
CCTCAGAGAGGTAGCTGATAGGCGGTGGTTGGTGATGTGTTGGTTGTCCCATGTGCGTTT
TTCATGGGTGCCTTTTCCCCACAATTTACTCTATTCCTAATCCTCCTCCCTCTAGTGGCC
ACCAATGGAATTCTTTACCTCTGGCTG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCGGCTCGAGAAGAAAACGAGCAAGAATCAGACGGCACAGATACAACTTCTTGTAATGGG
GGATGAGATTGTATGTCTGTGTGCTTGTGTGTTTATGTTCGTGTGCTTGTGTGTTTCCCA
CAATCCTATTCAAACTCCCTTCTCCAGTCATCAAAGTTAAGGGGCTATATACTGGGATAC
TACAATAATTCTAGTCTCTGGGTCTCTGGGTTAATGGTGTTTGCAGACCCCATGATAGTC
CCTCAGAGAGGTAGCTGATAGGCGGTGGTTGGTGATGTGTTGGTTGTCCCATGTGCGTTT
TTCATGGGTGCCTTTTCCCCACAATTTACTCTATTCCTAATCCTCCTCCCTCTAGTGGCC
ACCAATGGAATTCTTTACCTCTGGCTG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
141-289, - strand, RNAmicro p=0.952155 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
141-289, - strand, RNAmicro p=0.952155 |
|
11-387, gnl|bosTau2|chr20 (9137071-9137446) |
|
11-387, gnl|canFam2|chr2 (53876249-53876842) |
|
11-387, gnl|dasNov1|scaffold_47641 (18243-18800) |
|
11-387, gnl|echTel1|scaffold_323904 (4881-4301) |
|
11-387, gnl|galGal2|chrZ (3685721-3686281) |
|
11-387, gnl|hg17|chr5 (64545465-64546055) |
|
11-387, gnl|Hg17|chr5 (64546051-64545678) |
|
11-387, gnl|loxAfr1|scaffold_9983 (14042-14683) |
|
11-387, gnl|mm7|chr13 (101583569-101582977) |
|
11-387, gnl|Mm7|chr13 (101582979-101583356) |
|
11-387, gnl|monDom2|scaffold_27 (30398880-30399503) |
|
11-387, gnl|oryCun1|scaffold_204121 (81230-80630) |
|
11-387, gnl|panTro1|chr4 (51399476-51398886) |
|
11-387, gnl|rheMac2|chr6 (63070147-63070737) |
|
11-387, gnl|rn3|chr2 (35312685-35312093) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
11-387, gnl|bosTau2|chr20 (9137071-9137446) |
|
11-387, gnl|canFam2|chr2 (53876249-53876842) |
|
11-387, gnl|dasNov1|scaffold_47641 (18243-18800) |
|
11-387, gnl|echTel1|scaffold_323904 (4881-4301) |
|
11-387, gnl|galGal2|chrZ (3685721-3686281) |
|
11-387, gnl|hg17|chr5 (64545465-64546055) |
|
11-387, gnl|Hg17|chr5 (64546051-64545678) |
|
11-387, gnl|loxAfr1|scaffold_9983 (14042-14683) |
|
11-387, gnl|mm7|chr13 (101583569-101582977) |
|
11-387, gnl|Mm7|chr13 (101582979-101583356) |
|
11-387, gnl|monDom2|scaffold_27 (30398880-30399503) |
|
11-387, gnl|oryCun1|scaffold_204121 (81230-80630) |
|
11-387, gnl|panTro1|chr4 (51399476-51398886) |
|
11-387, gnl|rheMac2|chr6 (63070147-63070737) |
|
11-387, gnl|rn3|chr2 (35312685-35312093) |
