Pla1-C0000038_K03
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGCTACCGATGCAAATGTGAAGAACGAAAGTCTTTCATCTGTGCAGCAGCTGGGCGTTA AAATGACTGTTAGGTATGGCAAATTCCTCAAACTGTTAAAAGATGGTGCTGAAAGTGATC TTACCTTGGTTTTAAAACATTGTGAGAGGTTCCTGAAACAGCAGCAAGCTTGTGTGAAAT CTTCTCTTCTCTGCCTGCAGGGAAGTTACACCGGCCATGACTGGTTTGTATCCTCCTTGT TCATGATAATGTTGGGGGACAAAGAGAAAACATTCCGATTTCTTCAGCAGTTCTCCAGGC TTCTGACTTCCGCTTTCCTTTGGTTACCAAGACTACATATTTCTAGGTATCTGCCAATGG ACACTATAGAATCTGGTATACATCCAGTATATTTTTGCAGCACTCACTACATTGAAATGC TACTGAAAGCGGAGGTACCACTTGTGTTTTCAGCTTTTCACATGTCTGGATTTGCGCCAT CACAGATTTGCCTGCAAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGCTACCGATGCAAATGTGAAGAACGAAAGTCTTTCATCTGTGCAGCAGCTGGGCGTTA AAATGACTGTTAGGTATGGCAAATTCCTCAAACTGTTAAAAGATGGTGCTGAAAGTGATC TTACCTTGGTTTTAAAACATTGTGAGAGGTTCCTGAAACAGCAGCAAGCTTGTGTGAAAT CTTCTCTTCTCTGCCTGCAGGGAAGTTACACCGGCCATGACTGGTTTGTATCCTCCTTGT TCATGATAATGTTGGGGGACAAAGAGAAAACATTCCGATTTCTTCAGCAGTTCTCCAGGC TTCTGACTTCCGCTTTCCTTTGGTTACCAAGACTACATATTTCTAGGTATCTGCCAATGG ACACTATAGAATCTGGTATACATCCAGTATATTTTTGCAGCACTCACTACATTGAAATGC TACTGAAAGCGGAGGTACCACTTGTGTTTTCAGCTTTTCACATGTCTGGATTTGCGCCAT CACAGATTTGCCTGCAAT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 190-309, + strand, RNAz p=0.59568 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 190-309, + strand, RNAz p=0.59568 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of AK131446, + |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 70-189, gnl|bosTau2|chr9 (16317910-16317791) | |
| 70-189, gnl|canFam2|chr1 (63745579-63745757) | |
| 70-189, gnl|danRer3|chr20 (48264899-48264722) | |
| 70-189, gnl|dasNov1|scaffold_7342 (55671-55490) | |
| 70-189, gnl|echTel1|scaffold_318053 (51026-50843) | |
| 70-189, gnl|hg17|chr6 (121475843-121476025) | |
| 70-189, gnl|Hg17|chr6 (121476026-121475907) | |
| 70-189, gnl|loxAfr1|scaffold_165696 (687-506) | |
| 70-189, gnl|mm7|chr10 (55867595-55867776) | |
| 70-189, gnl|Mm7|chr10 (55867777-55867658) | |
| 70-189, gnl|monDom2|scaffold_0 (94386500-94386317) | |
| 70-189, gnl|oryCun1|scaffold_190959 (3008-3184) | |
| 70-189, gnl|panTro1|chr5 (123973882-123974064) | |
| 70-189, gnl|rheMac2|chr4 (142856213-142856032) | |
| 70-189, gnl|rn3|chr20 (34840918-34841101) | |
| 190-344, gnl|bosTau2|chr9 (16316644-16316490) | |
| 190-344, gnl|Hg17|chr6 (121475504-121475350) | |
| 190-344, gnl|Mm7|chr10 (55866913-55866759) | |
| 345-485, gnl|bosTau2|chr9 (16306554-16306414) | |
| 345-485, gnl|canFam2|chr1 (63737916-63738076) | |
| 345-485, gnl|danRer3|chr20 (48270306-48270142) | |
| 345-485, gnl|dasNov1|scaffold_7342 (62911-62751) | |
| 345-485, gnl|echTel1|scaffold_322021 (87511-87351) | |
| 345-485, gnl|galGal2|chr3 (60365384-60365225) | |
| 345-485, gnl|hg17|chr6 (121468864-121469024) | |
| 345-485, gnl|Hg17|chr6 (121469008-121468868) | |
| 345-485, gnl|mm7|chr10 (55858031-55858192) | |
| 345-485, gnl|Mm7|chr10 (55858175-55858035) | |
| 345-485, gnl|monDom2|scaffold_0 (94390121-94389963) | |
| 345-485, gnl|panTro1|chr5 (123965838-123965998) | |
| 345-485, gnl|rheMac2|chr4 (142863066-142862906) | |
| 345-485, gnl|rn3|chr20 (34817291-34817450) | |
| 345-485, gnl|tetNig1|chr14 (1425913-1425766) | |
| 345-485, gnl|xenTro1|scaffold_764 (77491-77651) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 70-189, gnl|bosTau2|chr9 (16317910-16317791) | |
| 70-189, gnl|canFam2|chr1 (63745579-63745757) | |
| 70-189, gnl|danRer3|chr20 (48264899-48264722) | |
| 70-189, gnl|dasNov1|scaffold_7342 (55671-55490) | |
| 70-189, gnl|echTel1|scaffold_318053 (51026-50843) | |
| 70-189, gnl|hg17|chr6 (121475843-121476025) | |
| 70-189, gnl|Hg17|chr6 (121476026-121475907) | |
| 70-189, gnl|loxAfr1|scaffold_165696 (687-506) | |
| 70-189, gnl|mm7|chr10 (55867595-55867776) | |
| 70-189, gnl|Mm7|chr10 (55867777-55867658) | |
| 70-189, gnl|monDom2|scaffold_0 (94386500-94386317) | |
| 70-189, gnl|oryCun1|scaffold_190959 (3008-3184) | |
| 70-189, gnl|panTro1|chr5 (123973882-123974064) | |
| 70-189, gnl|rheMac2|chr4 (142856213-142856032) | |
| 70-189, gnl|rn3|chr20 (34840918-34841101) | |
| 190-344, gnl|bosTau2|chr9 (16316644-16316490) | |
| 190-344, gnl|Hg17|chr6 (121475504-121475350) | |
| 190-344, gnl|Mm7|chr10 (55866913-55866759) | |
| 345-485, gnl|bosTau2|chr9 (16306554-16306414) | |
| 345-485, gnl|canFam2|chr1 (63737916-63738076) | |
| 345-485, gnl|danRer3|chr20 (48270306-48270142) | |
| 345-485, gnl|dasNov1|scaffold_7342 (62911-62751) | |
| 345-485, gnl|echTel1|scaffold_322021 (87511-87351) | |
| 345-485, gnl|galGal2|chr3 (60365384-60365225) | |
| 345-485, gnl|hg17|chr6 (121468864-121469024) | |
| 345-485, gnl|Hg17|chr6 (121469008-121468868) | |
| 345-485, gnl|mm7|chr10 (55858031-55858192) | |
| 345-485, gnl|Mm7|chr10 (55858175-55858035) | |
| 345-485, gnl|monDom2|scaffold_0 (94390121-94389963) | |
| 345-485, gnl|panTro1|chr5 (123965838-123965998) | |
| 345-485, gnl|rheMac2|chr4 (142863066-142862906) | |
| 345-485, gnl|rn3|chr20 (34817291-34817450) | |
| 345-485, gnl|tetNig1|chr14 (1425913-1425766) | |
| 345-485, gnl|xenTro1|scaffold_764 (77491-77651) |