Non-Coding RNA Search

Pla1-C0000038_K13

Sequence:


               
               GGAAAAGACTTAGTAGGTTTGTTTATATATTAAAACTGAACTTTTCTCTTCCCAAATCCA
TTCAGCTGCCCTAGAGTCTGGTTTTTGGACTTCTCTGTTTATTCCCAACACTTCCTAACA
GGGGCAGAGCTAATCACTTACGTATTTCCCTGCTGCTAAGCATAGCCAGCTTATGACCAC
TTAGGATTCAAGCACATGTTGATACCTTAAGACCAGTAAGCATTTGATAAAGTAGGAAAG
CAGGGTGGTTCGAATTGTTGTAATCAACAGTAAGAGGAGGAAATCAGTTCACGGAGCTGG
GCCAAAAGTTTAGTTTGTTTTTAATACAAAAAGGTTTTTAAATGCAACAAATCCTCAGAA
AAGGGAGACATAGCACCATTTGAACAGGAATTTTCTGATCACATTCTCTACACTCGAAAG
CTACTGAAAACAAAAAAAATCAGATGGGGCTGGTTTATTGTCAGATTTGCTCCGCACCCT
GGCTAAAGCAGTATGCTCTATAAAGGAGCTGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAAAGACTTAGTAGGTTTGTTTATATATTAAAACTGAACTTTTCTCTTCCCAAATCCA
TTCAGCTGCCCTAGAGTCTGGTTTTTGGACTTCTCTGTTTATTCCCAACACTTCCTAACA
GGGGCAGAGCTAATCACTTACGTATTTCCCTGCTGCTAAGCATAGCCAGCTTATGACCAC
TTAGGATTCAAGCACATGTTGATACCTTAAGACCAGTAAGCATTTGATAAAGTAGGAAAG
CAGGGTGGTTCGAATTGTTGTAATCAACAGTAAGAGGAGGAAATCAGTTCACGGAGCTGG
GCCAAAAGTTTAGTTTGTTTTTAATACAAAAAGGTTTTTAAATGCAACAAATCCTCAGAA
AAGGGAGACATAGCACCATTTGAACAGGAATTTTCTGATCACATTCTCTACACTCGAAAG
CTACTGAAAACAAAAAAAATCAGATGGGGCTGGTTTATTGTCAGATTTGCTCCGCACCCT
GGCTAAAGCAGTATGCTCTATAAAGGAGCTGGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               42-142, - strand, RNAz p=0.666755

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               42-142, - strand, RNAz p=0.666755

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-484, gnl|bosTau2|chr20 (9352758-9353240)
               

               
               5-484, gnl|Hg17|chr5 (64348909-64349378)
               

               
               5-484, gnl|Mm7|chr13 (101770565-101769844)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-484, gnl|bosTau2|chr20 (9352758-9353240)
               

               
               5-484, gnl|Hg17|chr5 (64348909-64349378)
               

               
               5-484, gnl|Mm7|chr13 (101770565-101769844)

	5-484, gnl\|bosTau2\|chr20 (9352758-9353240)
	5-484, gnl\|Hg17\|chr5 (64348909-64349378)
	5-484, gnl\|Mm7\|chr13 (101770565-101769844)