Non-Coding RNA Search

Pla1-C0000039_K02

Sequence:


               
               GGCCGCGGCTCGAGGCGAGGAGGACCATGCTGCCCTAGTGAATCAGGAAAGTGAGCAGTC
GGATGATGAACTTCTGACGCTGTCCAGTCCGCATGGCAATGCCAACGGCGACAAAGCTCA
CGGAGCCAGAAAGCCCAGCAAAAAGCAGCAGGAGCCAGCAGCCCCTCCGCCCCCTGAGGA
TGTGGACCTTCTGGGTCTGGAAGGGTCTGCAGTGAGTAAGAACTTCTCTTCGCCGGCGGC
TCCGCCCACCAACTCCGAACTTCTCAGTGACCTGTTTGGGGGTGGAGGCGCGGCCGGCCC
CGCACAGGCGGGCCAGTCGGGGGTGGAAGACGTGTTTCATCCGAGCGGACCGACGTCCAC
CCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCCGCGGCTCGAGGCGAGGAGGACCATGCTGCCCTAGTGAATCAGGAAAGTGAGCAGTC
GGATGATGAACTTCTGACGCTGTCCAGTCCGCATGGCAATGCCAACGGCGACAAAGCTCA
CGGAGCCAGAAAGCCCAGCAAAAAGCAGCAGGAGCCAGCAGCCCCTCCGCCCCCTGAGGA
TGTGGACCTTCTGGGTCTGGAAGGGTCTGCAGTGAGTAAGAACTTCTCTTCGCCGGCGGC
TCCGCCCACCAACTCCGAACTTCTCAGTGACCTGTTTGGGGGTGGAGGCGCGGCCGGCCC
CGCACAGGCGGGCCAGTCGGGGGTGGAAGACGTGTTTCATCCGAGCGGACCGACGTCCAC
CCA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               94-213, - strand, RNAz p=0.595838

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               94-213, - strand, RNAz p=0.595838

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               15-363, gnl|bosTau2|chr3 (53521206-53521554)
               

               
               15-363, gnl|Hg17|chr1 (65570159-65570507)
               

               
               15-363, gnl|Mm7|chr4 (100994857-100995205)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               15-363, gnl|bosTau2|chr3 (53521206-53521554)
               

               
               15-363, gnl|Hg17|chr1 (65570159-65570507)
               

               
               15-363, gnl|Mm7|chr4 (100994857-100995205)

	15-363, gnl\|bosTau2\|chr3 (53521206-53521554)
	15-363, gnl\|Hg17\|chr1 (65570159-65570507)
	15-363, gnl\|Mm7\|chr4 (100994857-100995205)