Non-Coding RNA Search

Pla1-C0000044_C11

Sequence:


               
               CCGAGACGTGGCGCGAGGTGCCCATGAGGAAGTAGATGAGGTTTGCAAAGAAGGACGTGT
AGAGGCTGTAGACGGGCTGCAGCCCGGCCAGCAGCGAGTAGGCGATGGCCTGCGGCACCA
GGATGATACCGATGAGCAGCCCCGACATGACGTCGCCTGCCAGGTCCTCCCTCGCCCGGT
AGCGCCGGAGCCAGTGCATGGCAGGGAACAGGCCCTGCAGCAGCGCCCAGGCCCCCTGCA
CGCTGCACGTGCAGCCCCGCCGCAGCCTGGCCTTCAGAGCCTCACGCAGGCCTGGGCGCT
CCGGGGGCCGCCGGCGGACCAGCACTGGGCCCCGGCCCTGCGGTGCGCACTCTGGGGACT
CTTCCATCCTGGGGCACGGCCGCCCCCGGACAACCTGCAAAGTGAGTTGAAGTGGGTGGG
GTGGCCAGATGTGTCAGTGTCCCGTCAGGACCTGTCAGAGGACGTCACCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGAGACGTGGCGCGAGGTGCCCATGAGGAAGTAGATGAGGTTTGCAAAGAAGGACGTGT
AGAGGCTGTAGACGGGCTGCAGCCCGGCCAGCAGCGAGTAGGCGATGGCCTGCGGCACCA
GGATGATACCGATGAGCAGCCCCGACATGACGTCGCCTGCCAGGTCCTCCCTCGCCCGGT
AGCGCCGGAGCCAGTGCATGGCAGGGAACAGGCCCTGCAGCAGCGCCCAGGCCCCCTGCA
CGCTGCACGTGCAGCCCCGCCGCAGCCTGGCCTTCAGAGCCTCACGCAGGCCTGGGCGCT
CCGGGGGCCGCCGGCGGACCAGCACTGGGCCCCGGCCCTGCGGTGCGCACTCTGGGGACT
CTTCCATCCTGGGGCACGGCCGCCCCCGGACAACCTGCAAAGTGAGTTGAAGTGGGTGGG
GTGGCCAGATGTGTCAGTGTCCCGTCAGGACCTGTCAGAGGACGTCACCG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|15930164|gb|AAH15517.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|15930164|gb|AAH15517.1|

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               3-161, + strand, RNAz p=0.902392

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               3-161, + strand, RNAz p=0.902392

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               3-418, gnl|bosTau2|chr6 (63559669-63559253)
               

               
               3-418, gnl|Hg17|chr4 (974957-975368)
               

               
               3-418, gnl|Mm7|chr5 (107854589-107854999)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-418, gnl|bosTau2|chr6 (63559669-63559253)
               

               
               3-418, gnl|Hg17|chr4 (974957-975368)
               

               
               3-418, gnl|Mm7|chr5 (107854589-107854999)

	3-418, gnl\|bosTau2\|chr6 (63559669-63559253)
	3-418, gnl\|Hg17\|chr4 (974957-975368)
	3-418, gnl\|Mm7\|chr5 (107854589-107854999)