Pla1-C0000045_D14
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCGGTGGCGGCCGCGGCTCGAGGACACAAGAGGCCCAGTCATGGAAAAAACCCCTGGCC TTTCAGACAGCATTGTTTTTAGGGAGAAAAAGCCGAAAGAGGTGATGGGAGGCTTTTCAA GACGCTGCTCCAAGCTCATCAACTCCTCTCAGCTGCTTTACCAGGAATACAGTGATGTGT TTTTGAACAAAGAAATTCAGAGCCAGCAGCGGCTGGACAGCCTGACAGAGGCTCCAGGAC CCGCCTCCCCCCGGCAGCCCCGGAAGGCCCTGGTCTCCTCAGAGTCTTATCTACAGCGAC TCTCCATGGCCTCCAGTGGTTCCCTTTGGCAGGAGATTCCCGTAGTACGCAACAGCACTG TCCTGCTCTCCATGACCCATGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCGGTGGCGGCCGCGGCTCGAGGACACAAGAGGCCCAGTCATGGAAAAAACCCCTGGCC TTTCAGACAGCATTGTTTTTAGGGAGAAAAAGCCGAAAGAGGTGATGGGAGGCTTTTCAA GACGCTGCTCCAAGCTCATCAACTCCTCTCAGCTGCTTTACCAGGAATACAGTGATGTGT TTTTGAACAAAGAAATTCAGAGCCAGCAGCGGCTGGACAGCCTGACAGAGGCTCCAGGAC CCGCCTCCCCCCGGCAGCCCCGGAAGGCCCTGGTCTCCTCAGAGTCTTATCTACAGCGAC TCTCCATGGCCTCCAGTGGTTCCCTTTGGCAGGAGATTCCCGTAGTACGCAACAGCACTG TCCTGCTCTCCATGACCCATGA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 225-322, - strand, RNAz p=0.532922 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 225-322, - strand, RNAz p=0.532922 |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 148-382, gnl|bosTau2|chr4 (61756323-61756557) | |
| 148-382, gnl|canFam2|chr16 (8642149-8642426) | |
| 148-382, gnl|canFam2|chr16 (8642426-8642123) | |
| 148-382, gnl|echTel1|scaffold_79151 (457-193) | |
| 148-382, gnl|echTel1|scaffold_79151 (193-479) | |
| 148-382, gnl|fr1|chrUn (185427288-185427537) | |
| 148-382, gnl|fr1|chrUn (185427537-185427288) | |
| 148-382, gnl|galGal2|chr1 (185126657-185126940) | |
| 148-382, gnl|galGal2|chr1 (185126940-185126618) | |
| 148-382, gnl|hg17|chr7 (143417020-143417297) | |
| 148-382, gnl|hg17|chr7 (143501823-143502130) | |
| 148-382, gnl|Hg17|chr7 (143501843-143502077) | |
| 148-382, gnl|loxAfr1|scaffold_20154 (65014-64741) | |
| 148-382, gnl|loxAfr1|scaffold_20154 (64741-65032) | |
| 148-382, gnl|mm7|chr6 (43318594-43318318) | |
| 148-382, gnl|mm7|chr6 (43318318-43318616) | |
| 148-382, gnl|Mm7|chr6 (43318337-43318571) | |
| 148-382, gnl|monDom2|scaffold_7 (2882725-2882449) | |
| 148-382, gnl|monDom2|scaffold_7 (2882449-2882754) | |
| 148-382, gnl|oryCun1|scaffold_90148 (687-975) | |
| 148-382, gnl|oryCun1|scaffold_90148 (975-658) | |
| 148-382, gnl|panTro1|chr6 (146111733-146111456) | |
| 148-382, gnl|panTro1|chr6 (146111456-146111763) | |
| 148-382, gnl|rheMac2|chr3 (181683716-181683439) | |
| 148-382, gnl|rheMac2|chr3 (181683439-181683746) | |
| 148-382, gnl|rn3|chr4 (71317455-71317179) | |
| 148-382, gnl|rn3|chr4 (71317179-71317477) | |
| 148-382, gnl|tetNig1|chrUn_random (28329871-28330138) | |
| 148-382, gnl|tetNig1|chrUn_random (28330138-28329855) | |
| 148-382, gnl|xenTro1|scaffold_510 (327705-327477) | |
| 148-382, gnl|xenTro1|scaffold_510 (327477-327705) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 148-382, gnl|bosTau2|chr4 (61756323-61756557) | |
| 148-382, gnl|canFam2|chr16 (8642149-8642426) | |
| 148-382, gnl|canFam2|chr16 (8642426-8642123) | |
| 148-382, gnl|echTel1|scaffold_79151 (457-193) | |
| 148-382, gnl|echTel1|scaffold_79151 (193-479) | |
| 148-382, gnl|fr1|chrUn (185427288-185427537) | |
| 148-382, gnl|fr1|chrUn (185427537-185427288) | |
| 148-382, gnl|galGal2|chr1 (185126657-185126940) | |
| 148-382, gnl|galGal2|chr1 (185126940-185126618) | |
| 148-382, gnl|hg17|chr7 (143417020-143417297) | |
| 148-382, gnl|hg17|chr7 (143501823-143502130) | |
| 148-382, gnl|Hg17|chr7 (143501843-143502077) | |
| 148-382, gnl|loxAfr1|scaffold_20154 (65014-64741) | |
| 148-382, gnl|loxAfr1|scaffold_20154 (64741-65032) | |
| 148-382, gnl|mm7|chr6 (43318594-43318318) | |
| 148-382, gnl|mm7|chr6 (43318318-43318616) | |
| 148-382, gnl|Mm7|chr6 (43318337-43318571) | |
| 148-382, gnl|monDom2|scaffold_7 (2882725-2882449) | |
| 148-382, gnl|monDom2|scaffold_7 (2882449-2882754) | |
| 148-382, gnl|oryCun1|scaffold_90148 (687-975) | |
| 148-382, gnl|oryCun1|scaffold_90148 (975-658) | |
| 148-382, gnl|panTro1|chr6 (146111733-146111456) | |
| 148-382, gnl|panTro1|chr6 (146111456-146111763) | |
| 148-382, gnl|rheMac2|chr3 (181683716-181683439) | |
| 148-382, gnl|rheMac2|chr3 (181683439-181683746) | |
| 148-382, gnl|rn3|chr4 (71317455-71317179) | |
| 148-382, gnl|rn3|chr4 (71317179-71317477) | |
| 148-382, gnl|tetNig1|chrUn_random (28329871-28330138) | |
| 148-382, gnl|tetNig1|chrUn_random (28330138-28329855) | |
| 148-382, gnl|xenTro1|scaffold_510 (327705-327477) | |
| 148-382, gnl|xenTro1|scaffold_510 (327477-327705) |