Non-Coding RNA Search

Pla1-C0000045_P18

Sequence:


               
               GGAAGTTAGACTTCGGTGTAAGTTTCAGTTCCACCTGTCACTTAGTAGCTCTGTGACTTG
GGCAACTTTCTTAATCTTTTAAATCTTCAGTTTCCTAATCTTAAGGATAGTGATATAGGA
ACCTACCCTATAAGGTCATCTGAAGATTAAATAAGATACATGATAAAGACTCAAGTATTA
TTTTTACAAATCTATTAATTATTGCCTATTAAACTCCAAATTTTTTTTGTTAGAGTATAC
TCAGTCTCTCAAGTGTGGTGTGTTAGGGTGCTTGCATCAGAATTGCCGGGGCCTAGGGTG
CAGTTTCCTGGATGCTGCCAAAACACAGAATCCAAATCTGTGAGCTGGCCGGTAATCTGC
ATTTCTAACGTGCAGAGTCAGAGAGTCTCGGTAAATTATCCTGTGGTGCATGAATTAGGC
TATTGCAACTGAAATATAGTTTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAGTTAGACTTCGGTGTAAGTTTCAGTTCCACCTGTCACTTAGTAGCTCTGTGACTTG
GGCAACTTTCTTAATCTTTTAAATCTTCAGTTTCCTAATCTTAAGGATAGTGATATAGGA
ACCTACCCTATAAGGTCATCTGAAGATTAAATAAGATACATGATAAAGACTCAAGTATTA
TTTTTACAAATCTATTAATTATTGCCTATTAAACTCCAAATTTTTTTTGTTAGAGTATAC
TCAGTCTCTCAAGTGTGGTGTGTTAGGGTGCTTGCATCAGAATTGCCGGGGCCTAGGGTG
CAGTTTCCTGGATGCTGCCAAAACACAGAATCCAAATCTGTGAGCTGGCCGGTAATCTGC
ATTTCTAACGTGCAGAGTCAGAGAGTCTCGGTAAATTATCCTGTGGTGCATGAATTAGGC
TATTGCAACTGAAATATAGTTTGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               71-165, - strand, RNAz p=0.998249

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               71-165, - strand, RNAz p=0.998249

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-437, gnl|bosTau2|chr21 (35429043-35428586)
               

               
               1-437, gnl|Hg17|chr14 (91016509-91016043)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-437, gnl|bosTau2|chr21 (35429043-35428586)
               

               
               1-437, gnl|Hg17|chr14 (91016509-91016043)

	1-437, gnl\|bosTau2\|chr21 (35429043-35428586)
	1-437, gnl\|Hg17\|chr14 (91016509-91016043)