Pla1-C0000048_M24
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCAACATAGTAAACACACCAAACAAAGTACAAAGCTGCTTTTTTAAGTGTGTAGATGTAA GAGCAGAACGTATCTATAATATTTAATGTATATGAACAGCTACTGTGATACGCAGAGGAA AGGACAGAGTGCAGAATTGAACTGCATTGAAGACCAATAGGAATTGTTTATTTTAACTTG AATTTGGGCAGGAAACGAAAGACAGAGGAGGAAGAAAACTGCTTGGAGGAACTTAAATAT TCATGAAGACAGTAATCATATAGGCATGAACTGGTTTCATACAGTGAGATCCTTGAGCAG ATGAAGTAGATCAACAAATTTTGGCAGAGTTTTGGTTTAAGAAAAACAAACCACTACCAC CTAGTACAAGTTAGACTGATGTTTTTACAAGTCTGCTCCTCAAAAAAAAGATGGGGGAAG AGACTATAAACCACTTTTAGCATAAGAATTGAAGTTGGTACAAATGTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCAACATAGTAAACACACCAAACAAAGTACAAAGCTGCTTTTTTAAGTGTGTAGATGTAA GAGCAGAACGTATCTATAATATTTAATGTATATGAACAGCTACTGTGATACGCAGAGGAA AGGACAGAGTGCAGAATTGAACTGCATTGAAGACCAATAGGAATTGTTTATTTTAACTTG AATTTGGGCAGGAAACGAAAGACAGAGGAGGAAGAAAACTGCTTGGAGGAACTTAAATAT TCATGAAGACAGTAATCATATAGGCATGAACTGGTTTCATACAGTGAGATCCTTGAGCAG ATGAAGTAGATCAACAAATTTTGGCAGAGTTTTGGTTTAAGAAAAACAAACCACTACCAC CTAGTACAAGTTAGACTGATGTTTTTACAAGTCTGCTCCTCAAAAAAAAGATGGGGGAAG AGACTATAAACCACTTTTAGCATAAGAATTGAAGTTGGTACAAATGTG |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 3-118, + strand, RNAz p=0.510394 | |
| 32-130, - strand, RNAz p=0.603475 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 3-118, + strand, RNAz p=0.510394 | |
| 32-130, - strand, RNAz p=0.603475 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of NM_183353, + |
| Aligned organism(s): 54 entry(ies) | More info |
| Aligned organism(s): 54 entry(ies) | Help | Less info |
| 3-130, gnl|bosTau2|chrX (21712129-21712256) | |
| 3-130, gnl|canFam2|chrX (60937792-60937195) | |
| 3-130, gnl|canFam2|chrX (60937199-60937853) | |
| 3-130, gnl|dasNov1|scaffold_3115 (18941-19515) | |
| 3-130, gnl|dasNov1|scaffold_3115 (19511-18884) | |
| 3-130, gnl|echTel1|scaffold_233199 (4411-4988) | |
| 3-130, gnl|echTel1|scaffold_233199 (4984-4354) | |
| 3-130, gnl|galGal2|chr4 (12091333-12090735) | |
| 3-130, gnl|galGal2|chr4 (12090739-12091390) | |
| 3-130, gnl|hg17|chr15 (47877370-47877973) | |
| 3-130, gnl|hg17|chrX (73592930-73593572) | |
| 3-130, gnl|Hg17|chrX (73593485-73593366) | |
| 3-130, gnl|loxAfr1|scaffold_22900 (14067-13474) | |
| 3-130, gnl|loxAfr1|scaffold_22900 (13475-14124) | |
| 3-130, gnl|mm7|chrX (99289061-99288471) | |
| 3-130, gnl|mm7|chrX (99288476-99289116) | |
| 3-130, gnl|Mm7|chrX (99289028-99288875) | |
| 3-130, gnl|monDom2|scaffold_224 (477685-478303) | |
| 3-130, gnl|monDom2|scaffold_224 (478293-477632) | |
| 3-130, gnl|oryCun1|scaffold_186434 (6119-5536) | |
| 3-130, gnl|oryCun1|scaffold_186434 (5540-6176) | |
| 3-130, gnl|panTro1|chr16 (47889483-47890086) | |
| 3-130, gnl|panTro1|chrX (76130280-76130930) | |
| 3-130, gnl|rheMac2|chr7 (28116359-28116957) | |
| 3-130, gnl|rheMac2|chrX (73684682-73685340) | |
| 3-130, gnl|rn3|chrX (92042211-92041642) | |
| 3-130, gnl|rn3|chrX (92041646-92042266) | |
| 179-466, gnl|bosTau2|chrX (21712258-21712536) | |
| 179-466, gnl|canFam2|chrX (60937792-60937195) | |
| 179-466, gnl|canFam2|chrX (60937199-60937853) | |
| 179-466, gnl|dasNov1|scaffold_3115 (18941-19515) | |
| 179-466, gnl|dasNov1|scaffold_3115 (19511-18884) | |
| 179-466, gnl|echTel1|scaffold_233199 (4411-4988) | |
| 179-466, gnl|echTel1|scaffold_233199 (4984-4354) | |
| 179-466, gnl|galGal2|chr4 (12091333-12090735) | |
| 179-466, gnl|galGal2|chr4 (12090739-12091390) | |
| 179-466, gnl|hg17|chr15 (47877370-47877973) | |
| 179-466, gnl|hg17|chrX (73592930-73593572) | |
| 179-466, gnl|Hg17|chrX (73593319-73593004) | |
| 179-466, gnl|loxAfr1|scaffold_22900 (14067-13474) | |
| 179-466, gnl|loxAfr1|scaffold_22900 (13475-14124) | |
| 179-466, gnl|mm7|chrX (99289061-99288471) | |
| 179-466, gnl|mm7|chrX (99288476-99289116) | |
| 179-466, gnl|Mm7|chrX (99288861-99288544) | |
| 179-466, gnl|monDom2|scaffold_224 (477685-478303) | |
| 179-466, gnl|monDom2|scaffold_224 (478293-477632) | |
| 179-466, gnl|oryCun1|scaffold_186434 (6119-5536) | |
| 179-466, gnl|oryCun1|scaffold_186434 (5540-6176) | |
| 179-466, gnl|panTro1|chr16 (47889483-47890086) | |
| 179-466, gnl|panTro1|chrX (76130280-76130930) | |
| 179-466, gnl|rheMac2|chr7 (28116359-28116957) | |
| 179-466, gnl|rheMac2|chrX (73684682-73685340) | |
| 179-466, gnl|rn3|chrX (92042211-92041642) | |
| 179-466, gnl|rn3|chrX (92041646-92042266) |
| Aligned organism(s): 54 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-130, gnl|bosTau2|chrX (21712129-21712256) | |
| 3-130, gnl|canFam2|chrX (60937792-60937195) | |
| 3-130, gnl|canFam2|chrX (60937199-60937853) | |
| 3-130, gnl|dasNov1|scaffold_3115 (18941-19515) | |
| 3-130, gnl|dasNov1|scaffold_3115 (19511-18884) | |
| 3-130, gnl|echTel1|scaffold_233199 (4411-4988) | |
| 3-130, gnl|echTel1|scaffold_233199 (4984-4354) | |
| 3-130, gnl|galGal2|chr4 (12091333-12090735) | |
| 3-130, gnl|galGal2|chr4 (12090739-12091390) | |
| 3-130, gnl|hg17|chr15 (47877370-47877973) | |
| 3-130, gnl|hg17|chrX (73592930-73593572) | |
| 3-130, gnl|Hg17|chrX (73593485-73593366) | |
| 3-130, gnl|loxAfr1|scaffold_22900 (14067-13474) | |
| 3-130, gnl|loxAfr1|scaffold_22900 (13475-14124) | |
| 3-130, gnl|mm7|chrX (99289061-99288471) | |
| 3-130, gnl|mm7|chrX (99288476-99289116) | |
| 3-130, gnl|Mm7|chrX (99289028-99288875) | |
| 3-130, gnl|monDom2|scaffold_224 (477685-478303) | |
| 3-130, gnl|monDom2|scaffold_224 (478293-477632) | |
| 3-130, gnl|oryCun1|scaffold_186434 (6119-5536) | |
| 3-130, gnl|oryCun1|scaffold_186434 (5540-6176) | |
| 3-130, gnl|panTro1|chr16 (47889483-47890086) | |
| 3-130, gnl|panTro1|chrX (76130280-76130930) | |
| 3-130, gnl|rheMac2|chr7 (28116359-28116957) | |
| 3-130, gnl|rheMac2|chrX (73684682-73685340) | |
| 3-130, gnl|rn3|chrX (92042211-92041642) | |
| 3-130, gnl|rn3|chrX (92041646-92042266) | |
| 179-466, gnl|bosTau2|chrX (21712258-21712536) | |
| 179-466, gnl|canFam2|chrX (60937792-60937195) | |
| 179-466, gnl|canFam2|chrX (60937199-60937853) | |
| 179-466, gnl|dasNov1|scaffold_3115 (18941-19515) | |
| 179-466, gnl|dasNov1|scaffold_3115 (19511-18884) | |
| 179-466, gnl|echTel1|scaffold_233199 (4411-4988) | |
| 179-466, gnl|echTel1|scaffold_233199 (4984-4354) | |
| 179-466, gnl|galGal2|chr4 (12091333-12090735) | |
| 179-466, gnl|galGal2|chr4 (12090739-12091390) | |
| 179-466, gnl|hg17|chr15 (47877370-47877973) | |
| 179-466, gnl|hg17|chrX (73592930-73593572) | |
| 179-466, gnl|Hg17|chrX (73593319-73593004) | |
| 179-466, gnl|loxAfr1|scaffold_22900 (14067-13474) | |
| 179-466, gnl|loxAfr1|scaffold_22900 (13475-14124) | |
| 179-466, gnl|mm7|chrX (99289061-99288471) | |
| 179-466, gnl|mm7|chrX (99288476-99289116) | |
| 179-466, gnl|Mm7|chrX (99288861-99288544) | |
| 179-466, gnl|monDom2|scaffold_224 (477685-478303) | |
| 179-466, gnl|monDom2|scaffold_224 (478293-477632) | |
| 179-466, gnl|oryCun1|scaffold_186434 (6119-5536) | |
| 179-466, gnl|oryCun1|scaffold_186434 (5540-6176) | |
| 179-466, gnl|panTro1|chr16 (47889483-47890086) | |
| 179-466, gnl|panTro1|chrX (76130280-76130930) | |
| 179-466, gnl|rheMac2|chr7 (28116359-28116957) | |
| 179-466, gnl|rheMac2|chrX (73684682-73685340) | |
| 179-466, gnl|rn3|chrX (92042211-92041642) | |
| 179-466, gnl|rn3|chrX (92041646-92042266) |