Pla1-C0000935_E07
|
GAACGGTGGGTACCTACTGGAGAGGACAGCGTGGGAACTGAACAGCTGGGAGATGAGGAT
GAGGAGACTGTTCACTGCATACCTTTTTCATAATGTTAGTATTTAAACAAGGTGAGTAAC
TTATCTATTACGAAGGTAAACTGAAAAAAAAATCAGTCTAAGAAAATTGATAGCAACAAT
AGCAAAGGGGTTCTACTCCCAGAGCAGAATAAAGCCCCCATTTCTAAAACTGATACTTCA
AGCAGACAATCTATAATGTGAGCTTAAGCTATGTAAGCTCTCATGCTTGTAAGTAACTAG
ATTGAAACTAGTCTCTCACAACTAAAAAACTGATCTTTGCTCAAGAATGTTTTTAAAACA
GAAGCGCATTAAGCTACAAACATATAGTGATGTAGTTATTTTGATATAACACATTTATTG
GAAAAAAAATGGACTGAATCAGGCTAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GAACGGTGGGTACCTACTGGAGAGGACAGCGTGGGAACTGAACAGCTGGGAGATGAGGAT
GAGGAGACTGTTCACTGCATACCTTTTTCATAATGTTAGTATTTAAACAAGGTGAGTAAC
TTATCTATTACGAAGGTAAACTGAAAAAAAAATCAGTCTAAGAAAATTGATAGCAACAAT
AGCAAAGGGGTTCTACTCCCAGAGCAGAATAAAGCCCCCATTTCTAAAACTGATACTTCA
AGCAGACAATCTATAATGTGAGCTTAAGCTATGTAAGCTCTCATGCTTGTAAGTAACTAG
ATTGAAACTAGTCTCTCACAACTAAAAAACTGATCTTTGCTCAAGAATGTTTTTAAAACA
GAAGCGCATTAAGCTACAAACATATAGTGATGTAGTTATTTTGATATAACACATTTATTG
GAAAAAAAATGGACTGAATCAGGCTAAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-305, gnl|bosTau2|chr3 (28548828-28549140) |
|
1-305, gnl|Hg17|chr1 (111428370-111428088) |
|
1-305, gnl|Mm7|chr3 (106332305-106332609) |
| |
|
337-449, gnl|bosTau2|chr3 (28549148-28549258) |
|
337-449, gnl|canFam2|chr6 (43909960-43909609) |
|
337-449, gnl|dasNov1|scaffold_61676 (6220-5872) |
|
337-449, gnl|echTel1|scaffold_267653 (955-611) |
|
337-449, gnl|hg17|chr1 (111427900-111428245) |
|
337-449, gnl|Hg17|chr1 (111428049-111427941) |
|
337-449, gnl|loxAfr1|scaffold_46824 (22374-22011) |
|
337-449, gnl|mm7|chr3 (106332766-106332433) |
|
337-449, gnl|Mm7|chr3 (106332617-106332724) |
|
337-449, gnl|monDom2|scaffold_0 (4691215-4690869) |
|
337-449, gnl|oryCun1|scaffold_207810 (142728-142394) |
|
337-449, gnl|panTro1|chr1 (110858268-110857923) |
|
337-449, gnl|rheMac2|chr1 (114210553-114210896) |
|
337-449, gnl|rn3|chr2 (201775316-201774974) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-305, gnl|bosTau2|chr3 (28548828-28549140) |
|
1-305, gnl|Hg17|chr1 (111428370-111428088) |
|
1-305, gnl|Mm7|chr3 (106332305-106332609) |
| |
|
337-449, gnl|bosTau2|chr3 (28549148-28549258) |
|
337-449, gnl|canFam2|chr6 (43909960-43909609) |
|
337-449, gnl|dasNov1|scaffold_61676 (6220-5872) |
|
337-449, gnl|echTel1|scaffold_267653 (955-611) |
|
337-449, gnl|hg17|chr1 (111427900-111428245) |
|
337-449, gnl|Hg17|chr1 (111428049-111427941) |
|
337-449, gnl|loxAfr1|scaffold_46824 (22374-22011) |
|
337-449, gnl|mm7|chr3 (106332766-106332433) |
|
337-449, gnl|Mm7|chr3 (106332617-106332724) |
|
337-449, gnl|monDom2|scaffold_0 (4691215-4690869) |
|
337-449, gnl|oryCun1|scaffold_207810 (142728-142394) |
|
337-449, gnl|panTro1|chr1 (110858268-110857923) |
|
337-449, gnl|rheMac2|chr1 (114210553-114210896) |
|
337-449, gnl|rn3|chr2 (201775316-201774974) |
