Non-Coding RNA Search

Pla1-C0000935_F06

Sequence:


               
               CGGGGGCGCAGAGGACCTGGCGGAGCTGGACCAGCTGCTGCGGCAGCGGCCGTCGGGGGC
CATGCCGAGCGAGATCAAAGGGCTGGAGTTCTCCGAGGGTTTGGCCCCGGGTAAGAAGCA
GCGCCTGAGCAAGAAGCTGCGGAGGAAGTTACAGATGTGGCTGTGGTCGCAGACCTTCTG
CCCGGTGCTGTACGCGTGGAACGACCTGGGCAGCCGCTTTTGGCCGCGCTACGTGAAGGT
GGGCAGCTGCTTCAGTAAGCGCTCATGCTCGGTGCCCGAGGGCATGGTGTGCAAGCCGTC
CAAGTCCGTGCACCTCACGGTGCTGCGGTGGCGCTGTCAGCGGCGCGGGGGCCAGCGCTG
CGGCTGGATTCCCATCCAGTACCCCATCATTTCCGAGTGCAAGTGCTCATGCTAGAACTC
AGGGCCCCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGGGGCGCAGAGGACCTGGCGGAGCTGGACCAGCTGCTGCGGCAGCGGCCGTCGGGGGC
CATGCCGAGCGAGATCAAAGGGCTGGAGTTCTCCGAGGGTTTGGCCCCGGGTAAGAAGCA
GCGCCTGAGCAAGAAGCTGCGGAGGAAGTTACAGATGTGGCTGTGGTCGCAGACCTTCTG
CCCGGTGCTGTACGCGTGGAACGACCTGGGCAGCCGCTTTTGGCCGCGCTACGTGAAGGT
GGGCAGCTGCTTCAGTAAGCGCTCATGCTCGGTGCCCGAGGGCATGGTGTGCAAGCCGTC
CAAGTCCGTGCACCTCACGGTGCTGCGGTGGCGCTGTCAGCGGCGCGGGGGCCAGCGCTG
CGGCTGGATTCCCATCCAGTACCCCATCATTTCCGAGTGCAAGTGCTCATGCTAGAACTC
AGGGCCCCCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               NOGG_RAT

Coded protein: 1 entry(ies)

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Protein identifier


               
               NOGG_RAT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               1-119, + strand, RNAz p=0.669496

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-119, + strand, RNAz p=0.669496

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-429, gnl|bosTau2|chr19 (1920387-1920815)
               

               
               1-429, gnl|Hg17|chr17 (52026868-52027297)
               

               
               1-429, gnl|Mm7|chr11 (89410775-89410344)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-429, gnl|bosTau2|chr19 (1920387-1920815)
               

               
               1-429, gnl|Hg17|chr17 (52026868-52027297)
               

               
               1-429, gnl|Mm7|chr11 (89410775-89410344)

	1-429, gnl\|bosTau2\|chr19 (1920387-1920815)
	1-429, gnl\|Hg17\|chr17 (52026868-52027297)
	1-429, gnl\|Mm7\|chr11 (89410775-89410344)