Non-Coding RNA Search

Pla1-C0000936_N16

Sequence:


               
               CCCGCGGTGGCGGCCGCGGCTCGAGGCTCCCCAAACGCTCGGGCGCCAAGCATCTGCTGA
TTCCACCCCGTGCCTGGCTCGTGTGTCTTTCGGTCCTGGCTGGGCATTGCCACCTCCCCC
TGGGCCAGCACCACCCACGTACCTCTCGGCAGAGGCCACAATTGACTGACTTGCTGTTGA
GCTGCCGCTCTTTGGCATGGCTGCATTTTGATGGCAGAGGGAGCAGTTATGCCCAGAGCC
CGGTGTGTCGGCATCACCAGTCTGACCTGAGCACCATGTGCTGCACGACATGACACGTGG
CACCGGGAGAACTGCCCAGCGTGGAAGGTCTGGGCCCAGATGGGATCTGGATGGCCAAGG
AACTCCCACCTGCCAGAGGGCCAGCCTGGTGGCTGCAGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCGCGGTGGCGGCCGCGGCTCGAGGCTCCCCAAACGCTCGGGCGCCAAGCATCTGCTGA
TTCCACCCCGTGCCTGGCTCGTGTGTCTTTCGGTCCTGGCTGGGCATTGCCACCTCCCCC
TGGGCCAGCACCACCCACGTACCTCTCGGCAGAGGCCACAATTGACTGACTTGCTGTTGA
GCTGCCGCTCTTTGGCATGGCTGCATTTTGATGGCAGAGGGAGCAGTTATGCCCAGAGCC
CGGTGTGTCGGCATCACCAGTCTGACCTGAGCACCATGTGCTGCACGACATGACACGTGG
CACCGGGAGAACTGCCCAGCGTGGAAGGTCTGGGCCCAGATGGGATCTGGATGGCCAAGG
AACTCCCACCTGCCAGAGGGCCAGCCTGGTGGCTGCAGCG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               175-290, + strand, RNAz p=0.752622

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               175-290, + strand, RNAz p=0.752622

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               26-371, gnl|bosTau2|chr5 (21813482-21813826)
               

               
               26-371, gnl|Hg17|chr12 (48246752-48246398)
               

               
               26-371, gnl|Mm7|chr15 (99235688-99235347)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               26-371, gnl|bosTau2|chr5 (21813482-21813826)
               

               
               26-371, gnl|Hg17|chr12 (48246752-48246398)
               

               
               26-371, gnl|Mm7|chr15 (99235688-99235347)

	26-371, gnl\|bosTau2\|chr5 (21813482-21813826)
	26-371, gnl\|Hg17\|chr12 (48246752-48246398)
	26-371, gnl\|Mm7\|chr15 (99235688-99235347)