Non-Coding RNA Search

Pla1-C0000940_A24

Sequence:


               
               TTATCTAGAAACATCTATAGGTTATGAAGCTTATACAAGTAGTTACTAACCCAGAATAAT
AGGGTTTATATTGATTGTGGTAACAATAAGGTAGTTAAAATAAGTTTTTTACCAGCAGAT
AGTTCCAAAGAATTTCAAGTGTAATTTTTTTTCTTCAGCCAGTAATCTTCAGCTGTACAG
TATTAGAGTATTTTGAAATTGCTGAAACTACTCGTTGGAGAGAAAAAAAATTTTTTTCAC
CAAAGATAAATATTTTGGTCTCATTGAAATATTTAGTGTACACCAAAGACTACTTTTTAC
TTGGCCAAAGCTAGCTTCTTTGAAGTCTTAAGTATGAAATTGTAACTAAAATGTGAAGGT
TCTCACTCATCTCTCATAGTGGTGCTACTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTATCTAGAAACATCTATAGGTTATGAAGCTTATACAAGTAGTTACTAACCCAGAATAAT
AGGGTTTATATTGATTGTGGTAACAATAAGGTAGTTAAAATAAGTTTTTTACCAGCAGAT
AGTTCCAAAGAATTTCAAGTGTAATTTTTTTTCTTCAGCCAGTAATCTTCAGCTGTACAG
TATTAGAGTATTTTGAAATTGCTGAAACTACTCGTTGGAGAGAAAAAAAATTTTTTTCAC
CAAAGATAAATATTTTGGTCTCATTGAAATATTTAGTGTACACCAAAGACTACTTTTTAC
TTGGCCAAAGCTAGCTTCTTTGAAGTCTTAAGTATGAAATTGTAACTAAAATGTGAAGGT
TCTCACTCATCTCTCATAGTGGTGCTACTTC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               130-240, + strand, RNAz p=0.999873

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               130-240, + strand, RNAz p=0.999873

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               160-248, + strand, RNAmicro p=0.999283

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               160-248, + strand, RNAmicro p=0.999283

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               102-391, gnl|bosTau2|chr10 (38922559-38922265)
               

               
               102-391, gnl|Hg17|chr15 (53696862-53696556)
               

               
               102-391, gnl|Mm7|chr9 (72947100-72947385)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               102-391, gnl|bosTau2|chr10 (38922559-38922265)
               

               
               102-391, gnl|Hg17|chr15 (53696862-53696556)
               

               
               102-391, gnl|Mm7|chr9 (72947100-72947385)

	102-391, gnl\|bosTau2\|chr10 (38922559-38922265)
	102-391, gnl\|Hg17\|chr15 (53696862-53696556)
	102-391, gnl\|Mm7\|chr9 (72947100-72947385)