Non-Coding RNA Search

Pla1-C0000940_F06

Sequence:


               
               ACCCACTTGTTAAATTTATTTTAGAAACATTTTATTTAGATCAAGTCCAGTTATTATTTT
TTTAAGGCTCTGATATATGTTAATTTTTGAGCATTATGTATCATATAGTTCCTTATTAAC
TAAGGTGTGGATTATCCATTTTTTTGGCTTTTCAAGTTAGTGCGTTTATCCATCAGTATA
TTTACTAAGGAGAACAGGCTGGAAGAGGAATAGTAAAGGAGGTGAAACAAATCAATTTCA
GGTGTTTCCAGAAGATTATAACCACATTGAGCTTTTGGAAACTTTTAATCCTGGAGCAAC
AAGAATGCTTTGCCTGAAGTTATTTTGATGTAATATGGACAAAACTTAGAAAATGAAAAG
GCTTTTGGACTGCTTAAGGAAAATAAGTAGATTATATATGCCTTGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCCACTTGTTAAATTTATTTTAGAAACATTTTATTTAGATCAAGTCCAGTTATTATTTT
TTTAAGGCTCTGATATATGTTAATTTTTGAGCATTATGTATCATATAGTTCCTTATTAAC
TAAGGTGTGGATTATCCATTTTTTTGGCTTTTCAAGTTAGTGCGTTTATCCATCAGTATA
TTTACTAAGGAGAACAGGCTGGAAGAGGAATAGTAAAGGAGGTGAAACAAATCAATTTCA
GGTGTTTCCAGAAGATTATAACCACATTGAGCTTTTGGAAACTTTTAATCCTGGAGCAAC
AAGAATGCTTTGCCTGAAGTTATTTTGATGTAATATGGACAAAACTTAGAAAATGAAAAG
GCTTTTGGACTGCTTAAGGAAAATAAGTAGATTATATATGCCTTGGA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               80-195, - strand, RNAz p=0.526009

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               80-195, - strand, RNAz p=0.526009

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-374, gnl|bosTau2|chr4 (49434251-49433876)
               

               
               1-374, gnl|Hg17|chr7 (128849440-128849799)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-374, gnl|bosTau2|chr4 (49434251-49433876)
               

               
               1-374, gnl|Hg17|chr7 (128849440-128849799)

	1-374, gnl\|bosTau2\|chr4 (49434251-49433876)
	1-374, gnl\|Hg17\|chr7 (128849440-128849799)