Non-Coding RNA Search

Pla1-C0001061_N19

Sequence:


               
               CAAAATTAGAATTTTTTGAGTTAATGACCCTTCATTCCTCTACTGAAAATCCTGTATTAT
CCTGTATGTAGTCAAGCTTTCAACCTGAGGAATGTTTGCTCTGAAAATCATGTGTTGATT
TTATTGTTAATCAATTACTTAGGATTCTGGGGCACTTTATTGTCACTACCTACAATAAAT
TTTGAGGTGAATTATGCAGTCCATAATTTCTATATGAACTATTTCCTCTAGAATTAATCT
ACCCCATGAACCAAAGGGTGGTAAGCATGGGCAGGATCAAAATCCATGTTCTAAAACTAG
TATCCCAGATGAACAGAAGAAATAGATGTTACTACCCCTTATATTTTCTCCTGTTCGCTC
ATCTTAATTCTGATGATGAAGTATACTGAACGGGCTCAGATAATATATATAGCATACTAA
TC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAAATTAGAATTTTTTGAGTTAATGACCCTTCATTCCTCTACTGAAAATCCTGTATTAT
CCTGTATGTAGTCAAGCTTTCAACCTGAGGAATGTTTGCTCTGAAAATCATGTGTTGATT
TTATTGTTAATCAATTACTTAGGATTCTGGGGCACTTTATTGTCACTACCTACAATAAAT
TTTGAGGTGAATTATGCAGTCCATAATTTCTATATGAACTATTTCCTCTAGAATTAATCT
ACCCCATGAACCAAAGGGTGGTAAGCATGGGCAGGATCAAAATCCATGTTCTAAAACTAG
TATCCCAGATGAACAGAAGAAATAGATGTTACTACCCCTTATATTTTCTCCTGTTCGCTC
ATCTTAATTCTGATGATGAAGTATACTGAACGGGCTCAGATAATATATATAGCATACTAA
TC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               10-106, - strand, RNAz p=0.587853

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               10-106, - strand, RNAz p=0.587853

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               10-396, gnl|bosTau2|chr9 (19396434-19396808)
               

               
               10-396, gnl|Hg17|chr6 (112539254-112538530)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-396, gnl|bosTau2|chr9 (19396434-19396808)
               

               
               10-396, gnl|Hg17|chr6 (112539254-112538530)

	10-396, gnl\|bosTau2\|chr9 (19396434-19396808)
	10-396, gnl\|Hg17\|chr6 (112539254-112538530)