Non-Coding RNA Search

Pla1-C0001062_B20

Sequence:


               
               TTTGAGATATGGGATTTTTGAACGATGTAAAGAGTTGGTGGAAGCAGGATATGATGTCAG
GCAACCAGACAAAGAAAATGTGTCGCTTCTTCACTGGGCTGCTATTAACAACAGATTGGA
TCTTGTAAAGTAAGATGGGATATATGTGTGTTAATTAAGTGTATGTTTATAATTCTGGAC
CTCTCTTTCATTTGTCTATTTTCTATAAGTACAAGTATAAATGTTGAATCATCCCTAATT
CTTTATTTTAAACGAATACTTGAAACTTTGTACCCCACACATCAGTTATCATAGTGTTGA
AAGGGACTGCAGAGGTCATCTGGACTAGGACCCTCATTGGTCCAAAAAGGAATATTAAAA
ATAAAGCCACAGGGGCCCATCATTATCAAGGTCAGGCAATCGGAGTTCCCATTGTGGCTC
ATGGATGCTAGTCAGGTTCATTACCGCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTGAGATATGGGATTTTTGAACGATGTAAAGAGTTGGTGGAAGCAGGATATGATGTCAG
GCAACCAGACAAAGAAAATGTGTCGCTTCTTCACTGGGCTGCTATTAACAACAGATTGGA
TCTTGTAAAGTAAGATGGGATATATGTGTGTTAATTAAGTGTATGTTTATAATTCTGGAC
CTCTCTTTCATTTGTCTATTTTCTATAAGTACAAGTATAAATGTTGAATCATCCCTAATT
CTTTATTTTAAACGAATACTTGAAACTTTGTACCCCACACATCAGTTATCATAGTGTTGA
AAGGGACTGCAGAGGTCATCTGGACTAGGACCCTCATTGGTCCAAAAAGGAATATTAAAA
ATAAAGCCACAGGGGCCCATCATTATCAAGGTCAGGCAATCGGAGTTCCCATTGTGGCTC
ATGGATGCTAGTCAGGTTCATTACCGCTG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               44-163, + strand, RNAz p=0.530584

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               44-163, + strand, RNAz p=0.530584

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of BC056152, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of BC056152, +

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               5-372, gnl|bosTau2|chr29 (19474377-19474010)
               

               
               5-372, gnl|Hg17|chr11 (19124302-19124660)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-372, gnl|bosTau2|chr29 (19474377-19474010)
               

               
               5-372, gnl|Hg17|chr11 (19124302-19124660)

	5-372, gnl\|bosTau2\|chr29 (19474377-19474010)
	5-372, gnl\|Hg17\|chr11 (19124302-19124660)