Non-Coding RNA Search

Pla1-C0001062_I15

Sequence:


               
               GCGGCTCGAGAATTTAAATAAAGTATTTGTGGGATGTTTTCTCCAGACCATTTTGAATTA
AAAGCTAAAATTATCTCCAAGGGACTGATGGTTTCAGGGGCTTTGGTATTGGTGTTGTAC
ATGGTTATTTGATTTATGTTTTTACAAATATGTGATATATAAAAGTACAAACCATCTTTT
GACTGAATGCGCTACGCTTTAAATCGTAAAAAAATTTCATGTACTCTAAATGATACCACT
ATAATCTTTTTTGGAACATAGTGTGCATATAAACAAGTAACTGAAGTGAAAACGAATATT
TCCAAGTGAGTATAGAGGAGCTTCACTTCAGGGAAATGAAGTATTAAATTTTGTATATTT
TCATTTTCATACAGATTTTCATTTTGAGAATTGGAATTTGTTTTTAAAGTATGTTACATT
CTAGAATAAATTCACATGTAGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCTCGAGAATTTAAATAAAGTATTTGTGGGATGTTTTCTCCAGACCATTTTGAATTA
AAAGCTAAAATTATCTCCAAGGGACTGATGGTTTCAGGGGCTTTGGTATTGGTGTTGTAC
ATGGTTATTTGATTTATGTTTTTACAAATATGTGATATATAAAAGTACAAACCATCTTTT
GACTGAATGCGCTACGCTTTAAATCGTAAAAAAATTTCATGTACTCTAAATGATACCACT
ATAATCTTTTTTGGAACATAGTGTGCATATAAACAAGTAACTGAAGTGAAAACGAATATT
TCCAAGTGAGTATAGAGGAGCTTCACTTCAGGGAAATGAAGTATTAAATTTTGTATATTT
TCATTTTCATACAGATTTTCATTTTGAGAATTGGAATTTGTTTTTAAAGTATGTTACATT
CTAGAATAAATTCACATGTAGGGG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               260-374, - strand, RNAz p=0.990232

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               260-374, - strand, RNAz p=0.990232

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               14-440, gnl|bosTau2|chr3 (53433688-53434110)
               

               
               14-440, gnl|Hg17|chr1 (65488834-65489572)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-440, gnl|bosTau2|chr3 (53433688-53434110)
               

               
               14-440, gnl|Hg17|chr1 (65488834-65489572)

	14-440, gnl\|bosTau2\|chr3 (53433688-53434110)
	14-440, gnl\|Hg17\|chr1 (65488834-65489572)