SmaI-SSC10D11
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAGTGATGGCAGGAGAGCTGGCTGATAAGAAGGACCGTGATGCATCACCTTCCAAGGAC GAAAGGAAGCGATCTCGGACTCCTGACCGAGAACGGGATAGAGACCGGGACCGGAAGTCT TCCCCATCTAAAGATAGGAAACGGCATCGGTCAAGGGATAGGCGGCGAGGAGGCAGCCGT CTCGTTCCCGGTCCCNGTCCAAGTCTACGGAAAGAGGACCGCAGCAACAAAAGGACCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAGTGATGGCAGGAGAGCTGGCTGATAAGAAGGACCGTGATGCATCACCTTCCAAGGAC GAAAGGAAGCGATCTCGGACTCCTGACCGAGAACGGGATAGAGACCGGGACCGGAAGTCT TCCCCATCTAAAGATAGGAAACGGCATCGGTCAAGGGATAGGCGGCGAGGAGGCAGCCGT CTCGTTCCCGGTCCCNGTCCAAGTCTACGGAAAGAGGACCGCAGCAACAAAAGGACCG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 6-164, - strand, RNAz p=0.707783 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 6-164, - strand, RNAz p=0.707783 |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 6-214, gnl|bosTau2|chr5 (26261072-26261281) | |
| 6-214, gnl|canFam2|chr27 (8705087-8704896) | |
| 6-214, gnl|canFam2|chr27 (8704848-8705055) | |
| 6-214, gnl|dasNov1|scaffold_197729 (757-952) | |
| 6-214, gnl|dasNov1|scaffold_197729 (1000-789) | |
| 6-214, gnl|echTel1|scaffold_325175 (25126-24938) | |
| 6-214, gnl|echTel1|scaffold_325175 (24894-25093) | |
| 6-214, gnl|fr1|chrUn (184504033-184504201) | |
| 6-214, gnl|hg17|chr12 (47525596-47525786) | |
| 6-214, gnl|hg17|chr12 (51410476-51410683) | |
| 6-214, gnl|Hg17|chr12 (47525833-47525624) | |
| 6-214, gnl|loxAfr1|scaffold_15255 (55585-55776) | |
| 6-214, gnl|loxAfr1|scaffold_15255 (55824-55617) | |
| 6-214, gnl|mm7|chr15 (98643403-98643591) | |
| 6-214, gnl|mm7|chr15 (98643637-98643433) | |
| 6-214, gnl|Mm7|chr15 (98643636-98643430) | |
| 6-214, gnl|monDom2|scaffold_388 (91080-91262) | |
| 6-214, gnl|monDom2|scaffold_388 (91310-91103) | |
| 6-214, gnl|oryCun1|scaffold_186849 (12422-12613) | |
| 6-214, gnl|oryCun1|scaffold_186849 (12661-12454) | |
| 6-214, gnl|panTro1|chr10 (48700549-48700739) | |
| 6-214, gnl|panTro1|chr10 (52638801-52639008) | |
| 6-214, gnl|rheMac2|chr11 (45968413-45968603) | |
| 6-214, gnl|rheMac2|chr11 (49806834-49807041) | |
| 6-214, gnl|rn3|chr7 (137483279-137483466) | |
| 6-214, gnl|rn3|chr7 (137483512-137483308) | |
| 6-214, gnl|tetNig1|chrUn_random (124644030-124644147) | |
| 6-214, gnl|xenTro1|scaffold_133 (1225090-1225251) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 6-214, gnl|bosTau2|chr5 (26261072-26261281) | |
| 6-214, gnl|canFam2|chr27 (8705087-8704896) | |
| 6-214, gnl|canFam2|chr27 (8704848-8705055) | |
| 6-214, gnl|dasNov1|scaffold_197729 (757-952) | |
| 6-214, gnl|dasNov1|scaffold_197729 (1000-789) | |
| 6-214, gnl|echTel1|scaffold_325175 (25126-24938) | |
| 6-214, gnl|echTel1|scaffold_325175 (24894-25093) | |
| 6-214, gnl|fr1|chrUn (184504033-184504201) | |
| 6-214, gnl|hg17|chr12 (47525596-47525786) | |
| 6-214, gnl|hg17|chr12 (51410476-51410683) | |
| 6-214, gnl|Hg17|chr12 (47525833-47525624) | |
| 6-214, gnl|loxAfr1|scaffold_15255 (55585-55776) | |
| 6-214, gnl|loxAfr1|scaffold_15255 (55824-55617) | |
| 6-214, gnl|mm7|chr15 (98643403-98643591) | |
| 6-214, gnl|mm7|chr15 (98643637-98643433) | |
| 6-214, gnl|Mm7|chr15 (98643636-98643430) | |
| 6-214, gnl|monDom2|scaffold_388 (91080-91262) | |
| 6-214, gnl|monDom2|scaffold_388 (91310-91103) | |
| 6-214, gnl|oryCun1|scaffold_186849 (12422-12613) | |
| 6-214, gnl|oryCun1|scaffold_186849 (12661-12454) | |
| 6-214, gnl|panTro1|chr10 (48700549-48700739) | |
| 6-214, gnl|panTro1|chr10 (52638801-52639008) | |
| 6-214, gnl|rheMac2|chr11 (45968413-45968603) | |
| 6-214, gnl|rheMac2|chr11 (49806834-49807041) | |
| 6-214, gnl|rn3|chr7 (137483279-137483466) | |
| 6-214, gnl|rn3|chr7 (137483512-137483308) | |
| 6-214, gnl|tetNig1|chrUn_random (124644030-124644147) | |
| 6-214, gnl|xenTro1|scaffold_133 (1225090-1225251) |