Spl1-SPL010011C10
|
CTTAAATATTTGGAAACAATCCAATAATTAAAAAAAAAGAATAAATAGCTTAAAAGAGAT
GGACATTTTTCTATTTTTATTTGCATACAACATGCAGAATTTGGACTTCTTTCAGTGGAA
TAAAGGGAACACCTTCTAACATCTTCCTTTTTTTCCCTTGGTAAACCTTGACATTCTGAA
ACATTCCATATGCCCTGTGTGCTAGGAACTACTCAGAGATTCAGGAAGTGAGATTTCCAC
TCAAGGTTGACACACTTGTGGTGAAGATACCTTTACACAGGTAACAACCTAATGTGAAGC
TTAATATGAACAGCCTGTAATAGGGACTCAGAGCTGGGGAAGTGGGATGTTTGGAGGAGT
CAAGAAAAGTTTTACCAAAGAGGACATTTGAGCTGTGCTTTGAAGGATGAATACTTCCTA
AGGTGGATCAAGTTAGGGAATGGCATGAGTAGGTAATACAAGGTATGAAAAAACTTGTCA
GGTTTGAGCAGTCGTCGGTAGTTCTTTGTGGCCATAGCTTGGCAGATGGGGTGGGAAAGT
GGTAGTAGAAGATAAGACTGAGAAGGTAGAATAAGCAGTTTCAATTAGAATTTTGGCAAG
GTTTTTTTATTTTCTTTTTTAtggccgcacttgtggcctgtggaactttccaggccaggg
actaacctgagctgtagttgtgacctgtggcacaactgccacaacgctggatcctttaac
ccgctgtgctgggctgggggttgaacccgtgcctctgaagcgacccaggctactgcagtt
ggattcgttaaccactgtgccaTGATGGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTTAAATATTTGGAAACAATCCAATAATTAAAAAAAAAGAATAAATAGCTTAAAAGAGAT
GGACATTTTTCTATTTTTATTTGCATACAACATGCAGAATTTGGACTTCTTTCAGTGGAA
TAAAGGGAACACCTTCTAACATCTTCCTTTTTTTCCCTTGGTAAACCTTGACATTCTGAA
ACATTCCATATGCCCTGTGTGCTAGGAACTACTCAGAGATTCAGGAAGTGAGATTTCCAC
TCAAGGTTGACACACTTGTGGTGAAGATACCTTTACACAGGTAACAACCTAATGTGAAGC
TTAATATGAACAGCCTGTAATAGGGACTCAGAGCTGGGGAAGTGGGATGTTTGGAGGAGT
CAAGAAAAGTTTTACCAAAGAGGACATTTGAGCTGTGCTTTGAAGGATGAATACTTCCTA
AGGTGGATCAAGTTAGGGAATGGCATGAGTAGGTAATACAAGGTATGAAAAAACTTGTCA
GGTTTGAGCAGTCGTCGGTAGTTCTTTGTGGCCATAGCTTGGCAGATGGGGTGGGAAAGT
GGTAGTAGAAGATAAGACTGAGAAGGTAGAATAAGCAGTTTCAATTAGAATTTTGGCAAG
GTTTTTTTATTTTCTTTTTTAtggccgcacttgtggcctgtggaactttccaggccaggg
actaacctgagctgtagttgtgacctgtggcacaactgccacaacgctggatcctttaac
ccgctgtgctgggctgggggttgaacccgtgcctctgaagcgacccaggctactgcagtt
ggattcgttaaccactgtgccaTGATGGG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
100-405, gnl|bosTau2|chr13 (49614299-49614618) |
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100-405, gnl|canFam2|chr24 (29928343-29928769) |
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100-405, gnl|dasNov1|scaffold_16421 (436-844) |
|
100-405, gnl|hg17|chr20 (36548782-36549216) |
|
100-405, gnl|Hg17|chr20 (36548834-36549163) |
|
100-405, gnl|loxAfr1|scaffold_6866 (28164-27747) |
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100-405, gnl|mm7|chr2 (158159321-158159682) |
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100-405, gnl|Mm7|chr2 (158159386-158159655) |
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100-405, gnl|panTro1|chr21 (38927872-38928306) |
|
100-405, gnl|rheMac2|chr10 (25964627-25964192) |
|
100-405, gnl|rn3|chr3 (149040844-149041214) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
100-405, gnl|bosTau2|chr13 (49614299-49614618) |
|
100-405, gnl|canFam2|chr24 (29928343-29928769) |
|
100-405, gnl|dasNov1|scaffold_16421 (436-844) |
|
100-405, gnl|hg17|chr20 (36548782-36549216) |
|
100-405, gnl|Hg17|chr20 (36548834-36549163) |
|
100-405, gnl|loxAfr1|scaffold_6866 (28164-27747) |
|
100-405, gnl|mm7|chr2 (158159321-158159682) |
|
100-405, gnl|Mm7|chr2 (158159386-158159655) |
|
100-405, gnl|panTro1|chr21 (38927872-38928306) |
|
100-405, gnl|rheMac2|chr10 (25964627-25964192) |
|
100-405, gnl|rn3|chr3 (149040844-149041214) |
