Non-Coding RNA Search

Spl1-SPL010024D01

Sequence:


               
               ATCTTGAGTCTCTGGAAATGTGTGAGCCTCTCTCTGTCCCTGGGGAGGAAGGCCGTGCAG
GACACTGCCTCGCCTTCTTGGGGATGTCAGCCTCCCGGCCTCTGCACTCCTGACTTGATC
GCTGCAGGAATAAAGAGAGCACAGACGCTTCTCTCAGAGCTGCTGCTGTGGACAAACAGG
AAGGGAGACAGCAGGTCCCTGCAATGCAAGCGCTCAGTGGAGAAACCTTGAAAAGGCAGA
GAGTGTTTGCAGGTGGACCACGGAGGAGCATCATGGGAAAACCTCTCCCATTCTCTCCCG
CAAACCCACTCCCTTCGGATTCCTCAGATGCCGCTGCCTGGCACAGCCTTTCCCTGCCTT
GGCGAGGGCGCCGCCCCAGCTCCAGAATCCAGAAGGAGTGGGCAGCTCAAGGTTGACACG
CACTGTCCCCCGATGCAAGGCTGACCTCTCTTTCTGCCTCAAGCCTGTGCGTGAGCGCAA
GTCTGATTTGTAAATGTCTGGCCATTTGGGATAAAAACAAACAGGCAAACAAAAAAAACA
AAAGAAAACAAAAAAACAGAGGCAGACTACACTGAGGTCATCAGGTGTGGCCTGGGTGAT
TCTCTGGGGAGAGTAAACATGGCCTTGACCTCTGTACTGTACCCTGGGGGAGCCCTCCTG
CAGAAGCGCATTTCCACATCCCAAGGCTCGTGGCACAAAAAAGACTTGGTAACGTATTAA
CAACTTATTTGTAAACATTCCAGCTCTCTGTTGGCCAAGGGAAGTGGGGTAGGAATGCCG
TGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCTTGAGTCTCTGGAAATGTGTGAGCCTCTCTCTGTCCCTGGGGAGGAAGGCCGTGCAG
GACACTGCCTCGCCTTCTTGGGGATGTCAGCCTCCCGGCCTCTGCACTCCTGACTTGATC
GCTGCAGGAATAAAGAGAGCACAGACGCTTCTCTCAGAGCTGCTGCTGTGGACAAACAGG
AAGGGAGACAGCAGGTCCCTGCAATGCAAGCGCTCAGTGGAGAAACCTTGAAAAGGCAGA
GAGTGTTTGCAGGTGGACCACGGAGGAGCATCATGGGAAAACCTCTCCCATTCTCTCCCG
CAAACCCACTCCCTTCGGATTCCTCAGATGCCGCTGCCTGGCACAGCCTTTCCCTGCCTT
GGCGAGGGCGCCGCCCCAGCTCCAGAATCCAGAAGGAGTGGGCAGCTCAAGGTTGACACG
CACTGTCCCCCGATGCAAGGCTGACCTCTCTTTCTGCCTCAAGCCTGTGCGTGAGCGCAA
GTCTGATTTGTAAATGTCTGGCCATTTGGGATAAAAACAAACAGGCAAACAAAAAAAACA
AAAGAAAACAAAAAAACAGAGGCAGACTACACTGAGGTCATCAGGTGTGGCCTGGGTGAT
TCTCTGGGGAGAGTAAACATGGCCTTGACCTCTGTACTGTACCCTGGGGGAGCCCTCCTG
CAGAAGCGCATTTCCACATCCCAAGGCTCGTGGCACAAAAAAGACTTGGTAACGTATTAA
CAACTTATTTGTAAACATTCCAGCTCTCTGTTGGCCAAGGGAAGTGGGGTAGGAATGCCG
TGGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               284-402, - strand, RNAz p=0.999533

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               284-402, - strand, RNAz p=0.999533

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               91-521, gnl|bosTau2|chr2 (71451174-71451605)
               

               
               91-521, gnl|Hg17|chr2 (232063352-232063775)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               91-521, gnl|bosTau2|chr2 (71451174-71451605)
               

               
               91-521, gnl|Hg17|chr2 (232063352-232063775)

	91-521, gnl\|bosTau2\|chr2 (71451174-71451605)
	91-521, gnl\|Hg17\|chr2 (232063352-232063775)