Non-Coding RNA Search

Spl1-SPL010025B08

Sequence:


               
               AAATGATATAATACACATAAAAGTGTTCTCTAAAGTGCAACTGTCCTTAATAAGAGCTAC
AAATATCTGTTATTCTAAAGCAACTGCGTCATGGTTGGTTGTAAAAGTGCACTGAGGTGG
CAGGCTCGCCGTCTGCTGCCCCCTCCTGGTCAGGATGGCAGGGTTAGCCTCCCAAAAAGC
CATGCCGCTCCTAGCTAGGATGTCTCCAACACAAGTAAGAGCTTTAGGATGGGGCATCCT
GGTCCTCCTAGAGATCCACCAGTGACCAAAGCTTCCCTGATCTCCCAGACCAACCCAGCC
TGGCCATCAGGATGTCAGGATGGTGGGAAGGGCTCTGGAGCTGGGCTGCCTGGGTTACAG
TCTTTAACCCAACACTACTAGTGTGACCTCAGGTAATTTCTATTGCATCTCTGTGCCTCA
GTTTCCTCATCTATAAAAATGGGGATGAGGAGTTCCCGTTGCGGCTCAGTGGGTTAAAAA
CCTGACTAGTggagttcccactgtggctcagtggtaacgaacccgactagtatccatgtg
gatttgggttccatcccgggccttgctcagtgggttaaggatccggcattgctgtggctg
tggtatatgtcacaggtgcAGCCTGTATCTTGCATCTTGCCGTGGCTGTGGGTACGCCGG
CAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATGATATAATACACATAAAAGTGTTCTCTAAAGTGCAACTGTCCTTAATAAGAGCTAC
AAATATCTGTTATTCTAAAGCAACTGCGTCATGGTTGGTTGTAAAAGTGCACTGAGGTGG
CAGGCTCGCCGTCTGCTGCCCCCTCCTGGTCAGGATGGCAGGGTTAGCCTCCCAAAAAGC
CATGCCGCTCCTAGCTAGGATGTCTCCAACACAAGTAAGAGCTTTAGGATGGGGCATCCT
GGTCCTCCTAGAGATCCACCAGTGACCAAAGCTTCCCTGATCTCCCAGACCAACCCAGCC
TGGCCATCAGGATGTCAGGATGGTGGGAAGGGCTCTGGAGCTGGGCTGCCTGGGTTACAG
TCTTTAACCCAACACTACTAGTGTGACCTCAGGTAATTTCTATTGCATCTCTGTGCCTCA
GTTTCCTCATCTATAAAAATGGGGATGAGGAGTTCCCGTTGCGGCTCAGTGGGTTAAAAA
CCTGACTAGTggagttcccactgtggctcagtggtaacgaacccgactagtatccatgtg
gatttgggttccatcccgggccttgctcagtgggttaaggatccggcattgctgtggctg
tggtatatgtcacaggtgcAGCCTGTATCTTGCATCTTGCCGTGGCTGTGGGTACGCCGG
CAGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               355-472, - strand, RNAz p=0.960978

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               355-472, - strand, RNAz p=0.960978

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-472, gnl|bosTau2|chr13 (45710347-45709884)
               

               
               1-472, gnl|Hg17|chr20 (33541161-33540742)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-472, gnl|bosTau2|chr13 (45710347-45709884)
               

               
               1-472, gnl|Hg17|chr20 (33541161-33540742)

	1-472, gnl\|bosTau2\|chr13 (45710347-45709884)
	1-472, gnl\|Hg17\|chr20 (33541161-33540742)