Non-Coding RNA Search

Spl1-SPL01A040046

Sequence:


               
               TGTAACCTAGAAATTAAAATGACTATTCAAATAACACCTCAAAATGATCAAATTAGCATT
TTGTGATTGCATAATAATGGGATTGTAGTAGTTATAACAGCACCATGGCTGCCTCTGGAG
TTAAGATCATGTCAACCCCTTGATAATAAAGCCTTTTCTGTGAGAGTCGACTTTAATAAT
TTCCAGATTGATTCTTTCCATAAATCATTTGACGTTCAGCACTAAATTTTTGTTACTCTT
GTAACTTAAAATTATTTTATTTTTTTTCAGCGTGTATTTAAGAAGTGAAATGAGTCCTGT
TTTAACGATTCACCATCTTGTCATTGAGCTCCCTGCTTTTTGTCTCAAATGTCAGAGTTT
CTCATGTGTTTTGATAATAACCCCCTTTTTATTTTTGCAAAGATTTGTTAAAGCCACTAA
AATATGTACAGTTTTTTTTCCCTACAAATATTCACAATGCTTTTCTTGGGAATAACGCTT
GCCTTATTTACATAATTAACTGAGTTGCTTAGGTCTCTTGGGCAAATGGTACATAATTGG
GGAGAGAAGGGGACAGGGAAGAGTTTGGGGTCTAATTAAATATGCTAAAAAACTACTTAA
TTATGTATTTCCTNCAGAGACTAACTGCTGTGAAATCCTCCTTAAGATTAAACTAGCATT
GGATTTGAAAAAAGGGTTTTGTTTTTAGTATGGCTTTCCAGTTACAGTGTAGCTAATTAN
GCATCTTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTAACCTAGAAATTAAAATGACTATTCAAATAACACCTCAAAATGATCAAATTAGCATT
TTGTGATTGCATAATAATGGGATTGTAGTAGTTATAACAGCACCATGGCTGCCTCTGGAG
TTAAGATCATGTCAACCCCTTGATAATAAAGCCTTTTCTGTGAGAGTCGACTTTAATAAT
TTCCAGATTGATTCTTTCCATAAATCATTTGACGTTCAGCACTAAATTTTTGTTACTCTT
GTAACTTAAAATTATTTTATTTTTTTTCAGCGTGTATTTAAGAAGTGAAATGAGTCCTGT
TTTAACGATTCACCATCTTGTCATTGAGCTCCCTGCTTTTTGTCTCAAATGTCAGAGTTT
CTCATGTGTTTTGATAATAACCCCCTTTTTATTTTTGCAAAGATTTGTTAAAGCCACTAA
AATATGTACAGTTTTTTTTCCCTACAAATATTCACAATGCTTTTCTTGGGAATAACGCTT
GCCTTATTTACATAATTAACTGAGTTGCTTAGGTCTCTTGGGCAAATGGTACATAATTGG
GGAGAGAAGGGGACAGGGAAGAGTTTGGGGTCTAATTAAATATGCTAAAAAACTACTTAA
TTATGTATTTCCTNCAGAGACTAACTGCTGTGAAATCCTCCTTAAGATTAAACTAGCATT
GGATTTGAAAAAAGGGTTTTGTTTTTAGTATGGCTTTCCAGTTACAGTGTAGCTAATTAN
GCATCTTTA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               506-625, - strand, RNAz p=0.984358

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               506-625, - strand, RNAz p=0.984358

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-729, gnl|bosTau2|chr24 (23952008-23951285)
               

               
               2-729, gnl|Hg17|chr9 (125497340-125496598)
               

               
               2-729, gnl|Mm7|chr2 (34454167-34454942)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-729, gnl|bosTau2|chr24 (23952008-23951285)
               

               
               2-729, gnl|Hg17|chr9 (125497340-125496598)
               

               
               2-729, gnl|Mm7|chr2 (34454167-34454942)

	2-729, gnl\|bosTau2\|chr24 (23952008-23951285)
	2-729, gnl\|Hg17\|chr9 (125497340-125496598)
	2-729, gnl\|Mm7\|chr2 (34454167-34454942)