Non-Coding RNA Search

Spl1-SPL01A080042

Sequence:


               
               GAGGCTGGTTCCACGAGTCTGCACCAGAGGCCATGAGACGGAGGCTGGTGTCAGGGCTGG
AGGACAGAGGCCATGCCTTTAGATGTCTCAACCAAAGCCCTTGTCTTCAATTCTCCCTTA
TTTGGTAAACTTGGGCATCTTTCTTGTTGACATGGCTCTGGTTACCTCACTCTTAGTCAT
AGCATTGCTGGGCTGTTCTGATATATTTGGAAGAAATTTGGGCTAAAATGGTCTGTCAGG
TGATATCTATATCCCGATGGACAGATTGAGGATGGGAGGGATCGAACAAGGTTTGGGTGC
AGGAGTTTTCAGAATTACCCCGTAATGAGTGGCAGAAGTGCTCTGAGCTCATCATATTCA
TGGAATGACTTCCAGGGGGCTTAGAGAACCCTCAGGCACTGGCTTCTTTGCTTAAAAATT
TAACAGTGTTTCAGACTGTGGAACTGAAGCTTTCAGGCGAAGTAATTTGCCCCAGGGACA
TAGGGAACCGGGGAGTCCCTGTGGGAGGCACCTGTCACTAGGCTTTGACTTCAGGCCGGT
GTTCCCACGATCCGATCCAGGCCTGGCTTGCCATCTTGGCTCCAGGGGGAAATTGGCTTC
CTCGATGTTCAGTCCAAGGGTCAAGAAGGGGACGTGTTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGCTGGTTCCACGAGTCTGCACCAGAGGCCATGAGACGGAGGCTGGTGTCAGGGCTGG
AGGACAGAGGCCATGCCTTTAGATGTCTCAACCAAAGCCCTTGTCTTCAATTCTCCCTTA
TTTGGTAAACTTGGGCATCTTTCTTGTTGACATGGCTCTGGTTACCTCACTCTTAGTCAT
AGCATTGCTGGGCTGTTCTGATATATTTGGAAGAAATTTGGGCTAAAATGGTCTGTCAGG
TGATATCTATATCCCGATGGACAGATTGAGGATGGGAGGGATCGAACAAGGTTTGGGTGC
AGGAGTTTTCAGAATTACCCCGTAATGAGTGGCAGAAGTGCTCTGAGCTCATCATATTCA
TGGAATGACTTCCAGGGGGCTTAGAGAACCCTCAGGCACTGGCTTCTTTGCTTAAAAATT
TAACAGTGTTTCAGACTGTGGAACTGAAGCTTTCAGGCGAAGTAATTTGCCCCAGGGACA
TAGGGAACCGGGGAGTCCCTGTGGGAGGCACCTGTCACTAGGCTTTGACTTCAGGCCGGT
GTTCCCACGATCCGATCCAGGCCTGGCTTGCCATCTTGGCTCCAGGGGGAAATTGGCTTC
CTCGATGTTCAGTCCAAGGGTCAAGAAGGGGACGTGTTCCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               404-518, + strand, RNAz p=0.784155

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               404-518, + strand, RNAz p=0.784155

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-626, gnl|bosTau2|chr2 (54567213-54566575)
               

               
               1-626, gnl|Hg17|chr2 (206421701-206422344)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-626, gnl|bosTau2|chr2 (54567213-54566575)
               

               
               1-626, gnl|Hg17|chr2 (206421701-206422344)

	1-626, gnl\|bosTau2\|chr2 (54567213-54566575)
	1-626, gnl\|Hg17\|chr2 (206421701-206422344)