Non-Coding RNA Search

Spl1-SPL01B030031

Sequence:


               
               ACTTCGCTCCGCGCAGCCTCCAGGTCTCGAGCTTGCAGGAGCGTTTGGTCCCACGTCGCC
GCCGCCGCCGCCGCCGACACCACCGCTATCGCCACCACCACCGGCTTCTCACAGTCGCCC
TGCGCGTCCTGTTCTCTGCGGCCAGCATCGCTTCAGACTGCTGGGTTCGCCCCGCTCCCG
CCGCCGCCACTCACTCGGCGCCCTTCCCCTGGCCCTCGTCCCCCCAATGTCTGACTCTGA
CTCTCGGACTGAGAAACGCAAGAAAAAAAGACCAAATGGCAAAGCAACCTTCCGATGTAA
GTTCTGAGTGTGACAGAGAAGGTGGACAGTTGCAGCCTGCGGAAAGGCCTCCTCAGCTCA
GGCCTGGGGCCCCCACCTCTCTACAAACAGAGCGGCAAGGTAATCCGGAAGGAGAAGGGG
ACCGCTGCCCCCAAGGCAGCCCCCAGGGCCCACTGGCCCCACCGACCAGCCCTGGCCCCT
TTGCTACCAGATCCCCGCTTTTCATCTTCGTGAGAAGATCCTCCCTGCTGTCTCGATCCT
CCAGTGGGTATTTCTCTTTTGACACAGACAGGAGCCCAGCACCCATGAGTTGTGACAAAT
CAACACAAACCCCAAGTCCTCCTTGCCAAGCCTTCAACCATTATCTCAGTGCGATCGAGT
ACCTGGTGGATGGCTCGTGGTGCCCAATCCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTTCGCTCCGCGCAGCCTCCAGGTCTCGAGCTTGCAGGAGCGTTTGGTCCCACGTCGCC
GCCGCCGCCGCCGCCGACACCACCGCTATCGCCACCACCACCGGCTTCTCACAGTCGCCC
TGCGCGTCCTGTTCTCTGCGGCCAGCATCGCTTCAGACTGCTGGGTTCGCCCCGCTCCCG
CCGCCGCCACTCACTCGGCGCCCTTCCCCTGGCCCTCGTCCCCCCAATGTCTGACTCTGA
CTCTCGGACTGAGAAACGCAAGAAAAAAAGACCAAATGGCAAAGCAACCTTCCGATGTAA
GTTCTGAGTGTGACAGAGAAGGTGGACAGTTGCAGCCTGCGGAAAGGCCTCCTCAGCTCA
GGCCTGGGGCCCCCACCTCTCTACAAACAGAGCGGCAAGGTAATCCGGAAGGAGAAGGGG
ACCGCTGCCCCCAAGGCAGCCCCCAGGGCCCACTGGCCCCACCGACCAGCCCTGGCCCCT
TTGCTACCAGATCCCCGCTTTTCATCTTCGTGAGAAGATCCTCCCTGCTGTCTCGATCCT
CCAGTGGGTATTTCTCTTTTGACACAGACAGGAGCCCAGCACCCATGAGTTGTGACAAAT
CAACACAAACCCCAAGTCCTCCTTGCCAAGCCTTCAACCATTATCTCAGTGCGATCGAGT
ACCTGGTGGATGGCTCGTGGTGCCCAATCCG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q70AD2_PIG

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q70AD2_PIG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               340-567, - strand, RNAz p=0.998798

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               340-567, - strand, RNAz p=0.998798

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               261-655, gnl|bosTau2|chr11 (1037144-1036750)
               

               
               261-655, gnl|Hg17|chr2 (111597539-111597945)
               

               
               261-655, gnl|Mm7|chr2 (127869471-127869865)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               261-655, gnl|bosTau2|chr11 (1037144-1036750)
               

               
               261-655, gnl|Hg17|chr2 (111597539-111597945)
               

               
               261-655, gnl|Mm7|chr2 (127869471-127869865)

	261-655, gnl\|bosTau2\|chr11 (1037144-1036750)
	261-655, gnl\|Hg17\|chr2 (111597539-111597945)
	261-655, gnl\|Mm7\|chr2 (127869471-127869865)