Spl1-SPL01B060099
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTCGTGGACCCTCAAGGCCAATACACCCCTGAGATCAAAGCCTCCACCTCTGTCCGCCCT TCTCCTTTCAGAATGAAGCCCATAGGACTTCAGGAGAGACGAGGGTCCAACGTATCTCTT ACACTCGACATGAGTAGCTTGGGGACTGTTGAACCCTTTGTGGCCACCCCAACCCCTCGG GAAAAGGTAGCAATGGAGTATCTGCAGTCAGCCAGCCGAATTCTCACAAGGTCACAGCTG AGGGACGCCGTGGCAAGTTCGCATTTACTCCAAAGTGAATTCATGGAAATACCAATGAAC TTTGTGGATCCCAAAGAAATTGATATTCCACGCCATGGAACTAAAAATCGTTATAAGACT ATTTTGCCAAATCCCCTCAGCCGAGTATGTTTAAGACCAAAAAATGTAACGGATTCTTTG AGCACCTACATTAATGCTAATTATATTAGGGGCTACAATGGCAAAGAGAAAGCATTCATC GCCACCCAGGGTCCCATGATCAACACAGTGAATGATTTCTGGCAGATGGTTTGGCAGGAA GACAGTCCTGTGATTGTTATGATCACAAAGCTCAAAGAGAAAAACGAGAAATGTGTGCTT TACTGGCCAGAAAAAAGAGGAATATATGGGAAAGTTGAGGTTCTGGTTATCAACGTCAAA GAATGTGATAACTATACTGTTCGAAATCTTGTCTTAAAGCAAGGAAGTCACACCCAACAT GTGAAGCATTACTGGTACACTTCATGGCCGGATCACAAGACTCCGGACAGTGCCCAGCCC CTTCTACAGCTCATGCTGGATGTGGAAGAAGACAGACTCGCCCTCGCGGGCCGAGGGCCT GTGATTGTCCAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTCGTGGACCCTCAAGGCCAATACACCCCTGAGATCAAAGCCTCCACCTCTGTCCGCCCT TCTCCTTTCAGAATGAAGCCCATAGGACTTCAGGAGAGACGAGGGTCCAACGTATCTCTT ACACTCGACATGAGTAGCTTGGGGACTGTTGAACCCTTTGTGGCCACCCCAACCCCTCGG GAAAAGGTAGCAATGGAGTATCTGCAGTCAGCCAGCCGAATTCTCACAAGGTCACAGCTG AGGGACGCCGTGGCAAGTTCGCATTTACTCCAAAGTGAATTCATGGAAATACCAATGAAC TTTGTGGATCCCAAAGAAATTGATATTCCACGCCATGGAACTAAAAATCGTTATAAGACT ATTTTGCCAAATCCCCTCAGCCGAGTATGTTTAAGACCAAAAAATGTAACGGATTCTTTG AGCACCTACATTAATGCTAATTATATTAGGGGCTACAATGGCAAAGAGAAAGCATTCATC GCCACCCAGGGTCCCATGATCAACACAGTGAATGATTTCTGGCAGATGGTTTGGCAGGAA GACAGTCCTGTGATTGTTATGATCACAAAGCTCAAAGAGAAAAACGAGAAATGTGTGCTT TACTGGCCAGAAAAAAGAGGAATATATGGGAAAGTTGAGGTTCTGGTTATCAACGTCAAA GAATGTGATAACTATACTGTTCGAAATCTTGTCTTAAAGCAAGGAAGTCACACCCAACAT GTGAAGCATTACTGGTACACTTCATGGCCGGATCACAAGACTCCGGACAGTGCCCAGCCC CTTCTACAGCTCATGCTGGATGTGGAAGAAGACAGACTCGCCCTCGCGGGCCGAGGGCCT GTGATTGTCCAC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 450-568, - strand, RNAz p=0.752146 | |
| 698-816, - strand, RNAz p=0.60792 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 450-568, - strand, RNAz p=0.752146 | |
| 698-816, - strand, RNAz p=0.60792 |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 97-289, gnl|bosTau2|chr5 (28682134-28681942) | |
| 97-289, gnl|Hg17|chr12 (69381372-69381180) | |
| 97-289, gnl|Mm7|chr10 (115733409-115733601) | |
| 450-588, gnl|bosTau2|chr16 (46949780-46949642) | |
| 450-588, gnl|canFam2|chr7 (3858875-3858682) | |
| 450-588, gnl|danRer3|chr7 (34492277-34492431) | |
| 450-588, gnl|dasNov1|scaffold_1520 (61249-61091) | |
| 450-588, gnl|echTel1|scaffold_322800 (50911-51103) | |
| 450-588, gnl|fr1|chrUn (180936349-180936199) | |
| 450-588, gnl|galGal2|chr32 (700108-699965) | |
| 450-588, gnl|hg17|chr1 (198854953-198855153) | |
| 450-588, gnl|Hg17|chr1 (198855109-198854971) | |
| 450-588, gnl|loxAfr1|scaffold_1189 (129536-129335) | |
| 450-588, gnl|mm7|chr1 (135027261-135027071) | |
| 450-588, gnl|Mm7|chr1 (135027108-135027246) | |
| 450-588, gnl|monDom2|scaffold_13 (1812130-1812337) | |
| 450-588, gnl|oryCun1|scaffold_197452 (12875-13058) | |
| 450-588, gnl|panTro1|chr1 (181611378-181611578) | |
| 450-588, gnl|rheMac2|chr1 (168340485-168340286) | |
| 450-588, gnl|rn3|chr13 (48113149-48112959) | |
| 450-588, gnl|tetNig1|chrUn_random (19197341-19197489) | |
| 698-852, gnl|bosTau2|chr5 (28656710-28656556) | |
| 698-852, gnl|Hg17|chr12 (69341146-69340992) | |
| 698-852, gnl|Mm7|chr10 (115760570-115760724) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 97-289, gnl|bosTau2|chr5 (28682134-28681942) | |
| 97-289, gnl|Hg17|chr12 (69381372-69381180) | |
| 97-289, gnl|Mm7|chr10 (115733409-115733601) | |
| 450-588, gnl|bosTau2|chr16 (46949780-46949642) | |
| 450-588, gnl|canFam2|chr7 (3858875-3858682) | |
| 450-588, gnl|danRer3|chr7 (34492277-34492431) | |
| 450-588, gnl|dasNov1|scaffold_1520 (61249-61091) | |
| 450-588, gnl|echTel1|scaffold_322800 (50911-51103) | |
| 450-588, gnl|fr1|chrUn (180936349-180936199) | |
| 450-588, gnl|galGal2|chr32 (700108-699965) | |
| 450-588, gnl|hg17|chr1 (198854953-198855153) | |
| 450-588, gnl|Hg17|chr1 (198855109-198854971) | |
| 450-588, gnl|loxAfr1|scaffold_1189 (129536-129335) | |
| 450-588, gnl|mm7|chr1 (135027261-135027071) | |
| 450-588, gnl|Mm7|chr1 (135027108-135027246) | |
| 450-588, gnl|monDom2|scaffold_13 (1812130-1812337) | |
| 450-588, gnl|oryCun1|scaffold_197452 (12875-13058) | |
| 450-588, gnl|panTro1|chr1 (181611378-181611578) | |
| 450-588, gnl|rheMac2|chr1 (168340485-168340286) | |
| 450-588, gnl|rn3|chr13 (48113149-48112959) | |
| 450-588, gnl|tetNig1|chrUn_random (19197341-19197489) | |
| 698-852, gnl|bosTau2|chr5 (28656710-28656556) | |
| 698-852, gnl|Hg17|chr12 (69341146-69340992) | |
| 698-852, gnl|Mm7|chr10 (115760570-115760724) |