Spl1-SPL01B070059
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTCCAGCGTCTGCCTGTCCGCCTGCGGCTGTACTGGACCCTGACGTCTGGCTCCCCTAG GCCGGGACCCTGCGTCGCGGACTCGCGATGGCCAAGCGCAGCTCGCTGTCCATCCGCATC GTGGAGGGGAAGAACCTGCCCGCCAAGGACATCACGGGCAGCAGCGACCCTTACTGCATC GTGAAGGTGGACAACGAGCCCATCATCCGGACGGCCACTGTGTGGAAGACCCTGTGCCCC TTCTGGGGCGAGGAGTATCAGGTGCATCTGCCCCCCACCTTCCACTCGGTGGCCTTCTAT GTCATGGACGAGGATGCCCTCAGCCGGGACGACGTTATTGGGAAGGTCTGCCTGACGAGG GACACCCTGGCCTCTCACCCTAAGGGTTTCAGCGGGTGGGCGCATCTGATGGAGGTCGAC CCGGACGAGGAGGTGCAGGGCGAAATCCACCTGCGGCTGGAGGTGGTGTCGGGGACCCGG GGCTGCCGGCTGCGCTGCTCGGTGCTGGAGGCCAGGGACCTCGCGCCCAAGGACCGGAAC GGTGCCTCTGACCCCTTTGTCCGTGTGCGCTACAAGGGCCGGACGCACGAGACCTCGATC GTGAAAAAGTCCTGCTACCCACGCTGGAACGAGACATTTGAGTTCGAGCTGGAGGAGGGG GCCGCGGAGGCGCTGTGCGTGGAGGCCTGGGACTGGGACCTTGTCAGCCGCAACGACTTT CTGGGCAAAGTGGTGGTCAACGTCCAGAGACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTCCAGCGTCTGCCTGTCCGCCTGCGGCTGTACTGGACCCTGACGTCTGGCTCCCCTAG GCCGGGACCCTGCGTCGCGGACTCGCGATGGCCAAGCGCAGCTCGCTGTCCATCCGCATC GTGGAGGGGAAGAACCTGCCCGCCAAGGACATCACGGGCAGCAGCGACCCTTACTGCATC GTGAAGGTGGACAACGAGCCCATCATCCGGACGGCCACTGTGTGGAAGACCCTGTGCCCC TTCTGGGGCGAGGAGTATCAGGTGCATCTGCCCCCCACCTTCCACTCGGTGGCCTTCTAT GTCATGGACGAGGATGCCCTCAGCCGGGACGACGTTATTGGGAAGGTCTGCCTGACGAGG GACACCCTGGCCTCTCACCCTAAGGGTTTCAGCGGGTGGGCGCATCTGATGGAGGTCGAC CCGGACGAGGAGGTGCAGGGCGAAATCCACCTGCGGCTGGAGGTGGTGTCGGGGACCCGG GGCTGCCGGCTGCGCTGCTCGGTGCTGGAGGCCAGGGACCTCGCGCCCAAGGACCGGAAC GGTGCCTCTGACCCCTTTGTCCGTGTGCGCTACAAGGGCCGGACGCACGAGACCTCGATC GTGAAAAAGTCCTGCTACCCACGCTGGAACGAGACATTTGAGTTCGAGCTGGAGGAGGGG GCCGCGGAGGCGCTGTGCGTGGAGGCCTGGGACTGGGACCTTGTCAGCCGCAACGACTTT CTGGGCAAAGTGGTGGTCAACGTCCAGAGACT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 209-328, + strand, RNAz p=0.995698 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 209-328, + strand, RNAz p=0.995698 |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 8-152, gnl|bosTau2|chr25 (31141441-31141297) | |
| 8-152, gnl|Hg17|chr7 (101751930-101751813) | |
| 8-152, gnl|Mm7|chr5 (135055323-135055457) | |
| 209-328, gnl|bosTau2|chr25 (31134895-31134776) | |
| 209-328, gnl|canFam2|chr6 (10690708-10690532) | |
| 209-328, gnl|danRer3|chr5 (66065047-66064917) | |
| 209-328, gnl|dasNov1|scaffold_39579 (13372-13546) | |
| 209-328, gnl|fr1|chrUn (48501179-48501314) | |
| 209-328, gnl|galGal2|chr19 (3912781-3912908) | |
| 209-328, gnl|hg17|chr7 (43786030-43786204) | |
| 209-328, gnl|Hg17|chr7 (101744460-101744341) | |
| 209-328, gnl|loxAfr1|scaffold_52368 (39886-39710) | |
| 209-328, gnl|mm7|chr5 (135062609-135062433) | |
| 209-328, gnl|Mm7|chr5 (135062473-135062592) | |
| 209-328, gnl|oryCun1|scaffold_196467 (1040-1203) | |
| 209-328, gnl|panTro1|chr6 (103539560-103539734) | |
| 209-328, gnl|rheMac2|chr3 (49781893-49782067) | |
| 209-328, gnl|rn3|chr12 (21679233-21679399) | |
| 209-328, gnl|tetNig1|chrUn_random (34348273-34348393) | |
| 378-516, gnl|bosTau2|chr25 (31133129-31132992) | |
| 378-516, gnl|Hg17|chr7 (101740998-101740861) | |
| 378-516, gnl|Mm7|chr5 (135064411-135064548) | |
| 597-732, gnl|bosTau2|chr25 (31130479-31130344) | |
| 597-732, gnl|Hg17|chr7 (101735395-101735260) | |
| 597-732, gnl|Mm7|chr5 (135067940-135068075) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 8-152, gnl|bosTau2|chr25 (31141441-31141297) | |
| 8-152, gnl|Hg17|chr7 (101751930-101751813) | |
| 8-152, gnl|Mm7|chr5 (135055323-135055457) | |
| 209-328, gnl|bosTau2|chr25 (31134895-31134776) | |
| 209-328, gnl|canFam2|chr6 (10690708-10690532) | |
| 209-328, gnl|danRer3|chr5 (66065047-66064917) | |
| 209-328, gnl|dasNov1|scaffold_39579 (13372-13546) | |
| 209-328, gnl|fr1|chrUn (48501179-48501314) | |
| 209-328, gnl|galGal2|chr19 (3912781-3912908) | |
| 209-328, gnl|hg17|chr7 (43786030-43786204) | |
| 209-328, gnl|Hg17|chr7 (101744460-101744341) | |
| 209-328, gnl|loxAfr1|scaffold_52368 (39886-39710) | |
| 209-328, gnl|mm7|chr5 (135062609-135062433) | |
| 209-328, gnl|Mm7|chr5 (135062473-135062592) | |
| 209-328, gnl|oryCun1|scaffold_196467 (1040-1203) | |
| 209-328, gnl|panTro1|chr6 (103539560-103539734) | |
| 209-328, gnl|rheMac2|chr3 (49781893-49782067) | |
| 209-328, gnl|rn3|chr12 (21679233-21679399) | |
| 209-328, gnl|tetNig1|chrUn_random (34348273-34348393) | |
| 378-516, gnl|bosTau2|chr25 (31133129-31132992) | |
| 378-516, gnl|Hg17|chr7 (101740998-101740861) | |
| 378-516, gnl|Mm7|chr5 (135064411-135064548) | |
| 597-732, gnl|bosTau2|chr25 (31130479-31130344) | |
| 597-732, gnl|Hg17|chr7 (101735395-101735260) | |
| 597-732, gnl|Mm7|chr5 (135067940-135068075) |