Spl1-SPL01B090052
|
AATTTATTGTTGACAATATAAAACTTACTCTTGGGGAAAAAAGGTAACCTATAAATTAAT
TTCCAGTCTTTTGCTCCAAGAATGCCTTCTGTATCTTGGCTAAAATCAAGTATTCTTGAA
ATCAATAGTAATCTGATTGCCTACAGAGAACAGTTGCCATCCTGTGTTTTAAACCAAAGA
GGAACTGTGCACTTTTGTGATAAATATAATTTAAAGGAGGATTATATTTCCTTTTTTAAT
TTATTAGCTATTGGTGCTGTTTATCCTGTTATCTATATTTCCTTTTCACTATTCAATTGC
TAGCACAGAAAAAGAAATGTGATATTAGGATTGGTAGCAGTACAACTTAAAAAACTTGGA
AGGGTGGAAAGTAAAGGCTCTCTTAAAATTTGCCTCCTTGATTAGAAAGATTGACTTGTG
TGTTTAGAGTTTCAATTAACACTGTTCTCTGGTGGATACTATCTTATGTACTATAGACTG
GCATGGGAGGGATTTTTACAGAATTTTAAATTCAGAATGAAGTGATATAACCAAGGTGGC
AGAGTAAGAGACCCCAGAACTTCCAACTGCAAAGATCAACAATAAGATAGCTATCCATAA
CAAAAATTAGCTTTGGGAGAACTCTGTAGTCCATTTAAGAAACCTGAGCAACACGATGGA
ACAAAAAACTTGACAATAACCACACAAAAGTGAAGAAAGAATGGTTCATTTTGCCTGCAT
CATTCCATTTCCTAAGCTGGCATTGTTTAGTTAAAAGAGGGAATTCCCCAGATGGAAAGC
GTTTGTTT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AATTTATTGTTGACAATATAAAACTTACTCTTGGGGAAAAAAGGTAACCTATAAATTAAT
TTCCAGTCTTTTGCTCCAAGAATGCCTTCTGTATCTTGGCTAAAATCAAGTATTCTTGAA
ATCAATAGTAATCTGATTGCCTACAGAGAACAGTTGCCATCCTGTGTTTTAAACCAAAGA
GGAACTGTGCACTTTTGTGATAAATATAATTTAAAGGAGGATTATATTTCCTTTTTTAAT
TTATTAGCTATTGGTGCTGTTTATCCTGTTATCTATATTTCCTTTTCACTATTCAATTGC
TAGCACAGAAAAAGAAATGTGATATTAGGATTGGTAGCAGTACAACTTAAAAAACTTGGA
AGGGTGGAAAGTAAAGGCTCTCTTAAAATTTGCCTCCTTGATTAGAAAGATTGACTTGTG
TGTTTAGAGTTTCAATTAACACTGTTCTCTGGTGGATACTATCTTATGTACTATAGACTG
GCATGGGAGGGATTTTTACAGAATTTTAAATTCAGAATGAAGTGATATAACCAAGGTGGC
AGAGTAAGAGACCCCAGAACTTCCAACTGCAAAGATCAACAATAAGATAGCTATCCATAA
CAAAAATTAGCTTTGGGAGAACTCTGTAGTCCATTTAAGAAACCTGAGCAACACGATGGA
ACAAAAAACTTGACAATAACCACACAAAAGTGAAGAAAGAATGGTTCATTTTGCCTGCAT
CATTCCATTTCCTAAGCTGGCATTGTTTAGTTAAAAGAGGGAATTCCCCAGATGGAAAGC
GTTTGTTT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
3-788, gnl|bosTau2|chr9 (50034472-50035260) |
|
3-788, gnl|canFam2|chr1 (42740534-42741059) |
|
3-788, gnl|dasNov1|scaffold_25375 (43901-44436) |
|
3-788, gnl|echTel1|scaffold_315284 (44755-45295) |
|
3-788, gnl|hg17|chr6 (149186114-149186637) |
|
3-788, gnl|mm7|chr10 (8144324-8143815) |
|
3-788, gnl|monDom2|scaffold_0 (57389488-57388961) |
|
3-788, gnl|oryCun1|scaffold_179791 (45044-45578) |
|
3-788, gnl|panTro1|chr5 (152633919-152634443) |
|
3-788, gnl|rheMac2|chr4 (114469942-114469419) |
|
3-788, gnl|rn3|chr1 (3086954-3086437) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
3-788, gnl|bosTau2|chr9 (50034472-50035260) |
|
3-788, gnl|canFam2|chr1 (42740534-42741059) |
|
3-788, gnl|dasNov1|scaffold_25375 (43901-44436) |
|
3-788, gnl|echTel1|scaffold_315284 (44755-45295) |
|
3-788, gnl|hg17|chr6 (149186114-149186637) |
|
3-788, gnl|mm7|chr10 (8144324-8143815) |
|
3-788, gnl|monDom2|scaffold_0 (57389488-57388961) |
|
3-788, gnl|oryCun1|scaffold_179791 (45044-45578) |
|
3-788, gnl|panTro1|chr5 (152633919-152634443) |
|
3-788, gnl|rheMac2|chr4 (114469942-114469419) |
|
3-788, gnl|rn3|chr1 (3086954-3086437) |
