Spl1-SPL01B120054
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ACGTGGTCTCGTGTAATCCTCACTGCAAATCCATAAAACAGCTCTCATGATCCCCGGCTT
AAAACAGGGAAACTGAGACACAGGGATGTTTAGAGGCCTAAGGGCACATGCAACTGGCTG
AGCAGGGATTTGAACCCAGCTCGGTTTGCTTCTCCTGTGAACAGGGTCTCCTTTCAGGAT
CATGAGCGAGAGACGTCGCCCCCATGGGCTCCCGGCTTCCTGCTCTCCCGGGGCGCTCTC
CTGCCCCTCTGAGCCAGAGCTGGGGTCAAGATGGGGCCGAGGCCCTGGGGTCGATGAGGT
GCCCATCAGGGAAGCAGGCGCCAAGGGGCAGGATGACAGACACCAGAAGCCCTCCCTGAA
CAAAGAGCGGGTGGGAGGCGGCCTGGAGCGTCCCCACCCCGCCTCTCCCAGCGCCTGCTG
AACCGAGACCACAGACAGAGCGGCGGGGAGAGCATGGCCGGGGCCACGGCCGCTCTGCTG
CCCCTCGTCCTGCAGCTCATGGGCCTGGCGCTGGCCCCGGGGATGGGCAGAGGGAGCGTT
GTCCCCAGGGAGCCCCCAGGTCTTGCTGACAGCCGTGACTACCAGCCACAGGCACCCGCC
CACTCCTCAGCCCTGGCCAGGGCCCCCCGGGAGCTGTGGCGCCCCCTGGAGGAGCGGCTG
GGAAGGCTGGAGGCTGAGGT
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Blue-coloured subsequences are predicted RNA structures by RNAz
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ACGTGGTCTCGTGTAATCCTCACTGCAAATCCATAAAACAGCTCTCATGATCCCCGGCTT
AAAACAGGGAAACTGAGACACAGGGATGTTTAGAGGCCTAAGGGCACATGCAACTGGCTG
AGCAGGGATTTGAACCCAGCTCGGTTTGCTTCTCCTGTGAACAGGGTCTCCTTTCAGGAT
CATGAGCGAGAGACGTCGCCCCCATGGGCTCCCGGCTTCCTGCTCTCCCGGGGCGCTCTC
CTGCCCCTCTGAGCCAGAGCTGGGGTCAAGATGGGGCCGAGGCCCTGGGGTCGATGAGGT
GCCCATCAGGGAAGCAGGCGCCAAGGGGCAGGATGACAGACACCAGAAGCCCTCCCTGAA
CAAAGAGCGGGTGGGAGGCGGCCTGGAGCGTCCCCACCCCGCCTCTCCCAGCGCCTGCTG
AACCGAGACCACAGACAGAGCGGCGGGGAGAGCATGGCCGGGGCCACGGCCGCTCTGCTG
CCCCTCGTCCTGCAGCTCATGGGCCTGGCGCTGGCCCCGGGGATGGGCAGAGGGAGCGTT
GTCCCCAGGGAGCCCCCAGGTCTTGCTGACAGCCGTGACTACCAGCCACAGGCACCCGCC
CACTCCTCAGCCCTGGCCAGGGCCCCCCGGGAGCTGTGGCGCCCCCTGGAGGAGCGGCTG
GGAAGGCTGGAGGCTGAGGT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
560-655, - strand, RNAmicro p=0.994349 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
560-655, - strand, RNAmicro p=0.994349 |
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6-165, gnl|bosTau2|chr4 (50032902-50033055) |
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6-165, gnl|Hg17|chr7 (128145213-128145054) |
| |
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285-533, gnl|bosTau2|chr4 (50033246-50033494) |
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285-533, gnl|Hg17|chr7 (128144845-128144604) |
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285-533, gnl|Mm7|chr6 (29440238-29440002) |
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542-680, gnl|bosTau2|chr4 (50036557-50036695) |
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542-680, gnl|canFam2|chr14 (10711591-10711345) |
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542-680, gnl|dasNov1|scaffold_48743 (7273-7028) |
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542-680, gnl|echTel1|scaffold_311368 (146711-146482) |
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542-680, gnl|hg17|chr7 (128142424-128142651) |
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542-680, gnl|Hg17|chr7 (128142563-128142449) |
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542-680, gnl|loxAfr1|scaffold_68823 (432-186) |
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542-680, gnl|mm7|chr6 (29437778-29438024) |
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542-680, gnl|Mm7|chr6 (29437938-29437803) |
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542-680, gnl|monDom2|scaffold_79 (1890819-1890648) |
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542-680, gnl|panTro1|chr6 (130534242-130534469) |
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542-680, gnl|rheMac2|chr3 (166239534-166239761) |
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542-680, gnl|rn3|chr4 (56646291-56646526) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
6-165, gnl|bosTau2|chr4 (50032902-50033055) |
|
6-165, gnl|Hg17|chr7 (128145213-128145054) |
| |
|
285-533, gnl|bosTau2|chr4 (50033246-50033494) |
|
285-533, gnl|Hg17|chr7 (128144845-128144604) |
|
285-533, gnl|Mm7|chr6 (29440238-29440002) |
| |
|
542-680, gnl|bosTau2|chr4 (50036557-50036695) |
|
542-680, gnl|canFam2|chr14 (10711591-10711345) |
|
542-680, gnl|dasNov1|scaffold_48743 (7273-7028) |
|
542-680, gnl|echTel1|scaffold_311368 (146711-146482) |
|
542-680, gnl|hg17|chr7 (128142424-128142651) |
|
542-680, gnl|Hg17|chr7 (128142563-128142449) |
|
542-680, gnl|loxAfr1|scaffold_68823 (432-186) |
|
542-680, gnl|mm7|chr6 (29437778-29438024) |
|
542-680, gnl|Mm7|chr6 (29437938-29437803) |
|
542-680, gnl|monDom2|scaffold_79 (1890819-1890648) |
|
542-680, gnl|panTro1|chr6 (130534242-130534469) |
|
542-680, gnl|rheMac2|chr3 (166239534-166239761) |
|
542-680, gnl|rn3|chr4 (56646291-56646526) |
