Spl1-SPL01B120073
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATAAGCAGCGCTGCTTCCTCTGGGGAAGGAAGGGACGTTGGGGCCACGGGTGCCGCAAGC TCACGCTGCTGGGGCAGCTGAGCGCCAATGGACCCCAGCCTTGGCAGGCCGGGGGATGAG GAAGGCGCCCTGGAGGCCAGCCCCCCAGAAGGCCTGCTGCAGGAACAGGTTGAGACTCCA TCCCACCACTTCTCCTCTGAAGAGCGGGCCCTGCTCTACGAGGAAGCTCTCTACACTGTC CTGTACCGCCTGGGTCAGCCCGAGCCCAACCATGTGGGGGAGTCCTCTGAGCTGCTGCGA TACCTGCAGGAGGCCTTCCACATGGAGCCCGAGGAGCACCTGCAGATGCTGCAGCAGGTC CAGGAGCTCGAGAAGCCAGTATTTTGTCTGAAAGCGACGGTGAAACAAGCCAAAGGCATT CTGGGCAAGGATGTCAGTGGGTTCAGTGACCCCTACTGCCTGCTGGCCATCATCGAGCAG GGGGCAGCCGTGCCAGGGGGCAGCCCCGGGCCCCGGCGTCGGCAGAAGGCCGTGGTGAGA CACACCATCCCGGAGGAGCAGACCCACCGCACCCAAGTCATAACCCAGACACTCAACCCC GTCTGGGACGAGACCTTCATCCTAGAGTTTGGGGACATAAACAACGCCAGCTTCCATCTG GACATGTGGGACCTGGACACCGTGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATAAGCAGCGCTGCTTCCTCTGGGGAAGGAAGGGACGTTGGGGCCACGGGTGCCGCAAGC TCACGCTGCTGGGGCAGCTGAGCGCCAATGGACCCCAGCCTTGGCAGGCCGGGGGATGAG GAAGGCGCCCTGGAGGCCAGCCCCCCAGAAGGCCTGCTGCAGGAACAGGTTGAGACTCCA TCCCACCACTTCTCCTCTGAAGAGCGGGCCCTGCTCTACGAGGAAGCTCTCTACACTGTC CTGTACCGCCTGGGTCAGCCCGAGCCCAACCATGTGGGGGAGTCCTCTGAGCTGCTGCGA TACCTGCAGGAGGCCTTCCACATGGAGCCCGAGGAGCACCTGCAGATGCTGCAGCAGGTC CAGGAGCTCGAGAAGCCAGTATTTTGTCTGAAAGCGACGGTGAAACAAGCCAAAGGCATT CTGGGCAAGGATGTCAGTGGGTTCAGTGACCCCTACTGCCTGCTGGCCATCATCGAGCAG GGGGCAGCCGTGCCAGGGGGCAGCCCCGGGCCCCGGCGTCGGCAGAAGGCCGTGGTGAGA CACACCATCCCGGAGGAGCAGACCCACCGCACCCAAGTCATAACCCAGACACTCAACCCC GTCTGGGACGAGACCTTCATCCTAGAGTTTGGGGACATAAACAACGCCAGCTTCCATCTG GACATGTGGGACCTGGACACCGTGGA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 1-170, + strand, RNAz p=0.999211 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-170, + strand, RNAz p=0.999211 |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 1-170, gnl|bosTau2|chr19 (49696080-49696252) | |
| 1-170, gnl|canFam2|chr9 (7752086-7751881) | |
| 1-170, gnl|echTel1|scaffold_322510 (529-334) | |
| 1-170, gnl|hg17|chr17 (71351240-71351421) | |
| 1-170, gnl|loxAfr1|scaffold_154002 (382-188) | |
| 1-170, gnl|mm7|chr11 (116185875-116186059) | |
| 1-170, gnl|Mm7|chr11 (116186107-116185950) | |
| 1-170, gnl|monDom2|scaffold_18 (33616329-33616510) | |
| 1-170, gnl|panTro1|chr19 (74708683-74708864) | |
| 1-170, gnl|rheMac2|chr16 (71163583-71163764) | |
| 1-170, gnl|rn3|chr10 (106198783-106198969) | |
| 203-313, gnl|bosTau2|chr19 (49696662-49696772) | |
| 203-313, gnl|Hg17|chr17 (71350944-71350834) | |
| 203-313, gnl|Mm7|chr11 (116185596-116185486) | |
| 439-623, gnl|bosTau2|chr19 (49697288-49697469) | |
| 439-623, gnl|canFam2|chr9 (7753296-7753075) | |
| 439-623, gnl|dasNov1|scaffold_83418 (10698-10923) | |
| 439-623, gnl|galGal2|chr18 (4457614-4457406) | |
| 439-623, gnl|hg17|chr17 (71350080-71350300) | |
| 439-623, gnl|Hg17|chr17 (71350290-71350109) | |
| 439-623, gnl|loxAfr1|scaffold_127698 (1295-1513) | |
| 439-623, gnl|mm7|chr11 (116184722-116184941) | |
| 439-623, gnl|Mm7|chr11 (116184931-116184750) | |
| 439-623, gnl|monDom2|scaffold_18 (33614726-33614956) | |
| 439-623, gnl|panTro1|chr19 (74707523-74707743) | |
| 439-623, gnl|rheMac2|chr16 (71162421-71162641) | |
| 439-623, gnl|rn3|chr10 (106197641-106197860) | |
| 439-623, gnl|tetNig1|chr3 (11881025-11881249) | |
| 439-623, gnl|xenTro1|scaffold_632 (621688-621912) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-170, gnl|bosTau2|chr19 (49696080-49696252) | |
| 1-170, gnl|canFam2|chr9 (7752086-7751881) | |
| 1-170, gnl|echTel1|scaffold_322510 (529-334) | |
| 1-170, gnl|hg17|chr17 (71351240-71351421) | |
| 1-170, gnl|loxAfr1|scaffold_154002 (382-188) | |
| 1-170, gnl|mm7|chr11 (116185875-116186059) | |
| 1-170, gnl|Mm7|chr11 (116186107-116185950) | |
| 1-170, gnl|monDom2|scaffold_18 (33616329-33616510) | |
| 1-170, gnl|panTro1|chr19 (74708683-74708864) | |
| 1-170, gnl|rheMac2|chr16 (71163583-71163764) | |
| 1-170, gnl|rn3|chr10 (106198783-106198969) | |
| 203-313, gnl|bosTau2|chr19 (49696662-49696772) | |
| 203-313, gnl|Hg17|chr17 (71350944-71350834) | |
| 203-313, gnl|Mm7|chr11 (116185596-116185486) | |
| 439-623, gnl|bosTau2|chr19 (49697288-49697469) | |
| 439-623, gnl|canFam2|chr9 (7753296-7753075) | |
| 439-623, gnl|dasNov1|scaffold_83418 (10698-10923) | |
| 439-623, gnl|galGal2|chr18 (4457614-4457406) | |
| 439-623, gnl|hg17|chr17 (71350080-71350300) | |
| 439-623, gnl|Hg17|chr17 (71350290-71350109) | |
| 439-623, gnl|loxAfr1|scaffold_127698 (1295-1513) | |
| 439-623, gnl|mm7|chr11 (116184722-116184941) | |
| 439-623, gnl|Mm7|chr11 (116184931-116184750) | |
| 439-623, gnl|monDom2|scaffold_18 (33614726-33614956) | |
| 439-623, gnl|panTro1|chr19 (74707523-74707743) | |
| 439-623, gnl|rheMac2|chr16 (71162421-71162641) | |
| 439-623, gnl|rn3|chr10 (106197641-106197860) | |
| 439-623, gnl|tetNig1|chr3 (11881025-11881249) | |
| 439-623, gnl|xenTro1|scaffold_632 (621688-621912) |