Non-Coding RNA Search

Spl1-SPL01B120086

Sequence:


               
               ATTTACCTTGGTGACCTCATCTTCTCATTTCTGTCGAAATTTGTAACCTCATAACTCTTC
TGTTCCCTTTTCCAAAGCAAAGTCTCCTTTCAAACAAAGGCCTCTACTTCTTAACATTAT
GGTATCAATGACAAATGTGGTCTAAAGTCTTATCTCTCCCAAGGGTATTATTTCAGTAGA
GATGGCAGTTCCTGTTTCTTTCAGAAAAGTTTCCTTTGGCCTTGTTGAATTCTGGACATC
ACTCTAAGGGTTTGGCTTCTAGAGTAATTTCCTGTTGGCTTTACCATTTCCATGTCTCTA
ATTCTGGTCATAGCTGTATCCCTTTGAGGAAATCAAATAAGTGAAAATTAAAATTTACAG
AGCAGATAAATTGTGGGATAATTCTTTGTTTGATAGCAGAGTCACCTCACGAATTTGAAA
TATGGCATGGCATAAAGATTTGTTCATGAagttcccgtcgtggcgcagtggttaacgaat
ccaactaggaaccatgaggttgcgggttcggtccctgcacttgctcaatgggttaagggt
ccggcgttgccgtgagctgtggtgtaggAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTACCTTGGTGACCTCATCTTCTCATTTCTGTCGAAATTTGTAACCTCATAACTCTTC
TGTTCCCTTTTCCAAAGCAAAGTCTCCTTTCAAACAAAGGCCTCTACTTCTTAACATTAT
GGTATCAATGACAAATGTGGTCTAAAGTCTTATCTCTCCCAAGGGTATTATTTCAGTAGA
GATGGCAGTTCCTGTTTCTTTCAGAAAAGTTTCCTTTGGCCTTGTTGAATTCTGGACATC
ACTCTAAGGGTTTGGCTTCTAGAGTAATTTCCTGTTGGCTTTACCATTTCCATGTCTCTA
ATTCTGGTCATAGCTGTATCCCTTTGAGGAAATCAAATAAGTGAAAATTAAAATTTACAG
AGCAGATAAATTGTGGGATAATTCTTTGTTTGATAGCAGAGTCACCTCACGAATTTGAAA
TATGGCATGGCATAAAGATTTGTTCATGAagttcccgtcgtggcgcagtggttaacgaat
ccaactaggaaccatgaggttgcgggttcggtccctgcacttgctcaatgggttaagggt
ccggcgttgccgtgagctgtggtgtaggAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               2-111, - strand, RNAz p=0.816515

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               2-111, - strand, RNAz p=0.816515

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               2-177, gnl|bosTau2|chr8 (21886981-21887157)
               

               
               2-177, gnl|Hg17|chr9 (334546-334758)
               


               
               230-445, gnl|bosTau2|chr8 (21888316-21888532)
               

               
               230-445, gnl|Hg17|chr9 (335097-335331)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-177, gnl|bosTau2|chr8 (21886981-21887157)
               

               
               2-177, gnl|Hg17|chr9 (334546-334758)
               


               
               230-445, gnl|bosTau2|chr8 (21888316-21888532)
               

               
               230-445, gnl|Hg17|chr9 (335097-335331)

	2-177, gnl\|bosTau2\|chr8 (21886981-21887157)
	2-177, gnl\|Hg17\|chr9 (334546-334758)

	230-445, gnl\|bosTau2\|chr8 (21888316-21888532)
	230-445, gnl\|Hg17\|chr9 (335097-335331)