Spl1-SPL01D020085
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ACAAAAGAATGGCTGGATAATATCCAGATAACCTATAATACTTGGGCTCCACCAGAGTCA
GGCTCTGAATAAATACGGACCTGTCAGAGATTGATAAAATAAACTACAATGCATAGTGCT
GTTTAAACAGTCCATTCAATACCATATATAAGCCAGCCTGCCTTCCATTGTGTCTGGAAT
TCTTATTTTTGTAGGTAAACAAATGCACATTCAGCACCGATTGAATAGCCCCTTGAACTA
TGCTCCCCAGTTTGCGTTGGGGTTAATCTCGTCGGTTTTAATATAGAGAGAAAAAAAGCA
CAAAGCGCCAGGGGTGGAATTGTTAGTGCTTTCACATCCACATTCCTCACATTTTGTCAG
GATGATAAACTGTAGGTAATGGACTGTCGCTGTTCCCCAGGACAGCCGAGCCAGGGAGGG
CACAAGGACCAGGCTGCCTGCCGCAAGATCTCACAACACTCAGGCGCTGTCTTTTCAGAC
AAGGAGAGAATTTATTTGGGGACCATGGGTCCGGGGACCGCACTTTTTCACCTTAGCAAT
GACAGCTTCCAGCCCCAGAACTGGGAGCTGGAGGTTGAGATCATTTGCTCGGCACTTGGA
TTTAAATCTCTCTCGAAGCAGAGTTGTTGACACTTGTCCTGGGATGCCAAGAAATGCAAA
TGATGACTCCCACATTCCTAAGTGACCCCAGCTCCCAGGTTAAAGTAGGAGGACAGGTAA
ATGAGCCCTCCCCCCACCCCTGACCTGCCGATGCTGCCGAGGGGTGTCTCCCCGCCCAGA
GTCAGCTGAAGAATGATC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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ACAAAAGAATGGCTGGATAATATCCAGATAACCTATAATACTTGGGCTCCACCAGAGTCA
GGCTCTGAATAAATACGGACCTGTCAGAGATTGATAAAATAAACTACAATGCATAGTGCT
GTTTAAACAGTCCATTCAATACCATATATAAGCCAGCCTGCCTTCCATTGTGTCTGGAAT
TCTTATTTTTGTAGGTAAACAAATGCACATTCAGCACCGATTGAATAGCCCCTTGAACTA
TGCTCCCCAGTTTGCGTTGGGGTTAATCTCGTCGGTTTTAATATAGAGAGAAAAAAAGCA
CAAAGCGCCAGGGGTGGAATTGTTAGTGCTTTCACATCCACATTCCTCACATTTTGTCAG
GATGATAAACTGTAGGTAATGGACTGTCGCTGTTCCCCAGGACAGCCGAGCCAGGGAGGG
CACAAGGACCAGGCTGCCTGCCGCAAGATCTCACAACACTCAGGCGCTGTCTTTTCAGAC
AAGGAGAGAATTTATTTGGGGACCATGGGTCCGGGGACCGCACTTTTTCACCTTAGCAAT
GACAGCTTCCAGCCCCAGAACTGGGAGCTGGAGGTTGAGATCATTTGCTCGGCACTTGGA
TTTAAATCTCTCTCGAAGCAGAGTTGTTGACACTTGTCCTGGGATGCCAAGAAATGCAAA
TGATGACTCCCACATTCCTAAGTGACCCCAGCTCCCAGGTTAAAGTAGGAGGACAGGTAA
ATGAGCCCTCCCCCCACCCCTGACCTGCCGATGCTGCCGAGGGGTGTCTCCCCGCCCAGA
GTCAGCTGAAGAATGATC
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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510-615, + strand, RNAmicro p=0.988313 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
510-615, + strand, RNAmicro p=0.988313 |
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260-792, gnl|bosTau2|chr12 (45242435-45241906) |
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260-792, gnl|canFam2|chr22 (58555575-58556304) |
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260-792, gnl|dasNov1|scaffold_8771 (48528-49216) |
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260-792, gnl|echTel1|scaffold_155744 (3664-4345) |
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260-792, gnl|galGal2|chr1 (133834540-133833805) |
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260-792, gnl|hg17|chr13 (105981134-105981817) |
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260-792, gnl|Hg17|chr13 (105981816-105981290) |
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260-792, gnl|loxAfr1|scaffold_260 (64248-64923) |
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260-792, gnl|mm7|chr8 (8626661-8627267) |
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260-792, gnl|Mm7|chr8 (8627266-8626794) |
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260-792, gnl|monDom2|scaffold_11 (42534934-42534228) |
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260-792, gnl|oryCun1|scaffold_205774 (25841-25156) |
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260-792, gnl|panTro1|chr14 (89383182-89383861) |
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260-792, gnl|rheMac2|chr17 (86721839-86722517) |
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260-792, gnl|rn3|chr16 (86177594-86176958) |
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260-792, gnl|xenTro1|scaffold_77 (1297467-1296787) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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260-792, gnl|bosTau2|chr12 (45242435-45241906) |
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260-792, gnl|canFam2|chr22 (58555575-58556304) |
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260-792, gnl|dasNov1|scaffold_8771 (48528-49216) |
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260-792, gnl|echTel1|scaffold_155744 (3664-4345) |
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260-792, gnl|galGal2|chr1 (133834540-133833805) |
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260-792, gnl|hg17|chr13 (105981134-105981817) |
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260-792, gnl|Hg17|chr13 (105981816-105981290) |
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260-792, gnl|loxAfr1|scaffold_260 (64248-64923) |
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260-792, gnl|mm7|chr8 (8626661-8627267) |
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260-792, gnl|Mm7|chr8 (8627266-8626794) |
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260-792, gnl|monDom2|scaffold_11 (42534934-42534228) |
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260-792, gnl|oryCun1|scaffold_205774 (25841-25156) |
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260-792, gnl|panTro1|chr14 (89383182-89383861) |
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260-792, gnl|rheMac2|chr17 (86721839-86722517) |
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260-792, gnl|rn3|chr16 (86177594-86176958) |
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260-792, gnl|xenTro1|scaffold_77 (1297467-1296787) |
