Non-Coding RNA Search

Spl1-SPL01D080071

Sequence:


               
               AACCCGGGGCTCGGAGCTGGAGCCGAGTCTGCGCCTGGGGGCCCTTATCTCTAGAGGCCA
GAGTTTCCACCCACCCAGGCAGCCCAGTGATCTGCCGGCACTGTCCCCTCCCACACCCAC
CTTGCTGGAGCCATGAGCAGAACTGTGAGGGAGACAGGGACCAAGCCCAGCTGACTGCTC
TGCCTTCTGCCCAGGAGGACCATGCGGCAGTAGCAGCCATGCTGCCCTTCCTGCTGGCCA
CACTGGGCACCACGGCCCTCAACAACAGCAACCCCAAGGACTACTGCTACAGTGCCCGCA
TCCGCAGCACCGTCCTGCAAGGCCTGCCATTTGGGGGCGTCCCCACTGTGCTGGCTCTGG
ACTTCATGTGCTTCCTTGCACTGCTGTTCTTATTCTCTATCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACCCGGGGCTCGGAGCTGGAGCCGAGTCTGCGCCTGGGGGCCCTTATCTCTAGAGGCCA
GAGTTTCCACCCACCCAGGCAGCCCAGTGATCTGCCGGCACTGTCCCCTCCCACACCCAC
CTTGCTGGAGCCATGAGCAGAACTGTGAGGGAGACAGGGACCAAGCCCAGCTGACTGCTC
TGCCTTCTGCCCAGGAGGACCATGCGGCAGTAGCAGCCATGCTGCCCTTCCTGCTGGCCA
CACTGGGCACCACGGCCCTCAACAACAGCAACCCCAAGGACTACTGCTACAGTGCCCGCA
TCCGCAGCACCGTCCTGCAAGGCCTGCCATTTGGGGGCGTCCCCACTGTGCTGGCTCTGG
ACTTCATGTGCTTCCTTGCACTGCTGTTCTTATTCTCTATCC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|47202712|emb|CAF95674.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|47202712|emb|CAF95674.1|

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               157-378, - strand, RNAz p=0.995218

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               157-378, - strand, RNAz p=0.995218

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               39-378, gnl|bosTau2|chr23 (17652435-17652096)
               

               
               39-378, gnl|Hg17|chr6 (44210133-44210459)
               

               
               39-378, gnl|Mm7|chr17 (43809242-43808935)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               39-378, gnl|bosTau2|chr23 (17652435-17652096)
               

               
               39-378, gnl|Hg17|chr6 (44210133-44210459)
               

               
               39-378, gnl|Mm7|chr17 (43809242-43808935)

	39-378, gnl\|bosTau2\|chr23 (17652435-17652096)
	39-378, gnl\|Hg17\|chr6 (44210133-44210459)
	39-378, gnl\|Mm7\|chr17 (43809242-43808935)