Non-Coding RNA Search

Spl1-SPL01D120098

Sequence:


               
               GTTTCCAAATACAGTCACACTGCAGGTTAAGGCATCACTGTATGAATTTGGGGGTGGGAA
GAACAACACGGTTTAGTCCATAGCACCTGGGAAAATGTGTTCCCTGGGATTCTGCCTACA
GAAACGAGCAAGAATCCCCTCCCCAACTCTGCCCCAGTGGAAACAGGGCTCCCCCCCAGC
TCTAAGCTGTGCGGGACACGTCCTGGGCCTGGAGCAGATGCTCAGGCCTCTTGTGGGTAT
CAACCTCCCCAGACAAGCTCGGCCCAGGGACTTGCATCCTCTTTTAGTTCTGTGGGTGTC
ACAGACTTGTGTACCTGCTTCTGCACCTGTGGCTGCCATCAGTCCTCTGTGATCACAGTG
GACACAACTTCTTCCCTTCTTTCTGTCCTAGGAAACTAGCTGCAGAAAGGGTGGAGCTGG
AGAGGTGGGGTCAAGTGTCAGCCTCAGTCCAAGCAGTTTACCTGCTCTCAGCTTTTATTG
GGATGTAAATGGAGCCAGGCTCTCTCTTTCTGGGCTCTTACCATATAGCCCCTGCTTATC
TTTGTGTGGAGAACCCCACGAAATTTCTCTGCTGATCCTGTCACCCTGGGAATTCTCTAA
TGTTCACATCTTTAGATCCCATAGGAGGAGCTGAAAGGCCATGTGGGTGCCTGCAGGGCC
TTTGGGTACAGGGAGAACTGAAATGGCACCATCTGGGCTTTCTAGGGGAACCCTGACTTG
AGTCCTGAAGGGAAGCTGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTCCAAATACAGTCACACTGCAGGTTAAGGCATCACTGTATGAATTTGGGGGTGGGAA
GAACAACACGGTTTAGTCCATAGCACCTGGGAAAATGTGTTCCCTGGGATTCTGCCTACA
GAAACGAGCAAGAATCCCCTCCCCAACTCTGCCCCAGTGGAAACAGGGCTCCCCCCCAGC
TCTAAGCTGTGCGGGACACGTCCTGGGCCTGGAGCAGATGCTCAGGCCTCTTGTGGGTAT
CAACCTCCCCAGACAAGCTCGGCCCAGGGACTTGCATCCTCTTTTAGTTCTGTGGGTGTC
ACAGACTTGTGTACCTGCTTCTGCACCTGTGGCTGCCATCAGTCCTCTGTGATCACAGTG
GACACAACTTCTTCCCTTCTTTCTGTCCTAGGAAACTAGCTGCAGAAAGGGTGGAGCTGG
AGAGGTGGGGTCAAGTGTCAGCCTCAGTCCAAGCAGTTTACCTGCTCTCAGCTTTTATTG
GGATGTAAATGGAGCCAGGCTCTCTCTTTCTGGGCTCTTACCATATAGCCCCTGCTTATC
TTTGTGTGGAGAACCCCACGAAATTTCTCTGCTGATCCTGTCACCCTGGGAATTCTCTAA
TGTTCACATCTTTAGATCCCATAGGAGGAGCTGAAAGGCCATGTGGGTGCCTGCAGGGCC
TTTGGGTACAGGGAGAACTGAAATGGCACCATCTGGGCTTTCTAGGGGAACCCTGACTTG
AGTCCTGAAGGGAAGCTGCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               39-237, - strand, RNAz p=0.998973

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               39-237, - strand, RNAz p=0.998973

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-735, gnl|bosTau2|chr9 (43715252-43715983)
               

               
               1-735, gnl|Hg17|chr6 (136952437-136951743)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-735, gnl|bosTau2|chr9 (43715252-43715983)
               

               
               1-735, gnl|Hg17|chr6 (136952437-136951743)

	1-735, gnl\|bosTau2\|chr9 (43715252-43715983)
	1-735, gnl\|Hg17\|chr6 (136952437-136951743)