Spl1-SPL01E010096
|
TGCATCTCTCATCGTCATGGTGTTGGCCCGGACTGAGCTGCCCACCCTCCGATACCGTTT
CAACGCACCCATTGCCCGCGACGCGCTGCCTCCCTACTCCTGGCATTACGCGCCCTGGAC
CAAGTGCTCAGCCCAGTGTGCAGGCGGTAGCCAGGTGCAGGCAGTGGAGTGCCGGAGTCA
GCTGGACAGCTCAGCCGTGGCTCCCCACCACTGCAGCGCCCACAGCAAGCTGCCCAAGAG
GCAGCGCGCCTGCAACACGGAGCCCTGCCCACCCGACTGGGTGGTAGGGAACTGGTCGCG
CTGCAGCCGCAGCTGTGATGCAGGCGTGCGCAGCCGCTCTGTCGTGTGCCAGCGCCGTGT
GTCGGCCGCCGAGGAAAAGGCGCTGGACGACAGCGCGTGCCCGCAGCCGCGCCCGCCGGT
TCTGGAGGCCTGCCACGGCCCCGCCTGCCCTCCGGAGTGGGCCGCCCTCGACTGGTCGGA
GTGCACCCCCAGCTGCGGGCCGGGCCTTCGCCATCGTGTGGTCCTTTGTAAGAGCGCATA
CCAGCGCGCCACACTGCCTCTCGCGCACTGTGCGCCTGCAGCCAAGCCGCCTGCCACCAT
GCGCTGCAACCTGCGCCGCTGCCCGCCCGCCCGCTGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGCATCTCTCATCGTCATGGTGTTGGCCCGGACTGAGCTGCCCACCCTCCGATACCGTTT
CAACGCACCCATTGCCCGCGACGCGCTGCCTCCCTACTCCTGGCATTACGCGCCCTGGAC
CAAGTGCTCAGCCCAGTGTGCAGGCGGTAGCCAGGTGCAGGCAGTGGAGTGCCGGAGTCA
GCTGGACAGCTCAGCCGTGGCTCCCCACCACTGCAGCGCCCACAGCAAGCTGCCCAAGAG
GCAGCGCGCCTGCAACACGGAGCCCTGCCCACCCGACTGGGTGGTAGGGAACTGGTCGCG
CTGCAGCCGCAGCTGTGATGCAGGCGTGCGCAGCCGCTCTGTCGTGTGCCAGCGCCGTGT
GTCGGCCGCCGAGGAAAAGGCGCTGGACGACAGCGCGTGCCCGCAGCCGCGCCCGCCGGT
TCTGGAGGCCTGCCACGGCCCCGCCTGCCCTCCGGAGTGGGCCGCCCTCGACTGGTCGGA
GTGCACCCCCAGCTGCGGGCCGGGCCTTCGCCATCGTGTGGTCCTTTGTAAGAGCGCATA
CCAGCGCGCCACACTGCCTCTCGCGCACTGTGCGCCTGCAGCCAAGCCGCCTGCCACCAT
GCGCTGCAACCTGCGCCGCTGCCCGCCCGCCCGCTGG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
146-283, gnl|bosTau2|chr7 (14297214-14297077) |
|
146-283, gnl|canFam2|chr20 (56095388-56095540) |
|
146-283, gnl|danRer3|chr8 (11996657-11996520) |
|
146-283, gnl|echTel1|scaffold_270659 (6948-7100) |
|
146-283, gnl|fr1|chrUn (126756814-126757004) |
|
146-283, gnl|galGal2|chr28 (1708554-1708404) |
|
146-283, gnl|hg17|chr19 (8557000-8557154) |
|
146-283, gnl|Hg17|chr19 (8557136-8556999) |
|
146-283, gnl|mm7|chr17 (31624967-31624816) |
|
146-283, gnl|Mm7|chr17 (31624829-31624966) |
|
146-283, gnl|monDom2|scaffold_136 (127410-127258) |
|
146-283, gnl|oryCun1|scaffold_131076 (5005-4854) |
|
146-283, gnl|panTro1|chr20 (8910715-8910869) |
|
146-283, gnl|rheMac2|chr19 (8572646-8572798) |
|
146-283, gnl|rn3|chr7 (16068814-16068663) |
|
146-283, gnl|tetNig1|chr1 (15312380-15312213) |
|
146-283, gnl|xenTro1|scaffold_87 (1589174-1589019) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
146-283, gnl|bosTau2|chr7 (14297214-14297077) |
|
146-283, gnl|canFam2|chr20 (56095388-56095540) |
|
146-283, gnl|danRer3|chr8 (11996657-11996520) |
|
146-283, gnl|echTel1|scaffold_270659 (6948-7100) |
|
146-283, gnl|fr1|chrUn (126756814-126757004) |
|
146-283, gnl|galGal2|chr28 (1708554-1708404) |
|
146-283, gnl|hg17|chr19 (8557000-8557154) |
|
146-283, gnl|Hg17|chr19 (8557136-8556999) |
|
146-283, gnl|mm7|chr17 (31624967-31624816) |
|
146-283, gnl|Mm7|chr17 (31624829-31624966) |
|
146-283, gnl|monDom2|scaffold_136 (127410-127258) |
|
146-283, gnl|oryCun1|scaffold_131076 (5005-4854) |
|
146-283, gnl|panTro1|chr20 (8910715-8910869) |
|
146-283, gnl|rheMac2|chr19 (8572646-8572798) |
|
146-283, gnl|rn3|chr7 (16068814-16068663) |
|
146-283, gnl|tetNig1|chr1 (15312380-15312213) |
|
146-283, gnl|xenTro1|scaffold_87 (1589174-1589019) |
