Non-Coding RNA Search

Spl1-SPL01E020056

Sequence:


               
               AACAAACGTCAGGCTCCACTGCAGACATAGGTGAGGTAGACATGGTTTGGTTCCACGGGA
GGGTGCTTATAAATGCTGTGTAATTGGTGCTAGGGTCTGGGGTAATCCACAAAGACTCAC
CTTTAGCCCCCATTAACTACCAGGGGAGAGAAGCGCTGGCTGTAAATAACCACCCCGCGG
TATAGACTTAGTGAGTGCCTGGGGAGGGGATGTTTTCTCCCAGCACCTGGGAGGAGGGGT
CAGGACTGGTTCCTGGAAGGACAGGCAGGTGTGGGGGTGCCATAGCCTGGTTCCCTCGTG
GGGCATGGGTGCCTGCTGTCGGGCCACCGCTTGATCCCAGCTGCCGCTAATACCATCCTT
GCTTGAGCCCCCTCCTTCCTCTCCCAGGACCTCCGCCTCCCACTGGCTGCTTCACGGTCT
CCTTGGATGAGCCCACCCTGGGCCCCTGGGAGGGACCCGGAGTCGGGGTCCCGAGTGGGG
CAGGTGTGAGGTGCTGTCCTCCTCCCACAGGCCTCTCCCTGGAACGCCTACCCAACTCGA
TCGCCTCCCGCCACCGCCTGACTGAGAGGGAGGAGGAAGTGATCACCTGTTTCGAGAGGG
CCTCCTGGATCGCTCAGGTGTTCCTGCAGGAATTGGAGAAGGTGAGCTGGGAATAACAGC
CCCGTGGTCACCGCTACCCTCTATGAAGCACCTGTATCCATGTGCCTTTGCCCCCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACAAACGTCAGGCTCCACTGCAGACATAGGTGAGGTAGACATGGTTTGGTTCCACGGGA
GGGTGCTTATAAATGCTGTGTAATTGGTGCTAGGGTCTGGGGTAATCCACAAAGACTCAC
CTTTAGCCCCCATTAACTACCAGGGGAGAGAAGCGCTGGCTGTAAATAACCACCCCGCGG
TATAGACTTAGTGAGTGCCTGGGGAGGGGATGTTTTCTCCCAGCACCTGGGAGGAGGGGT
CAGGACTGGTTCCTGGAAGGACAGGCAGGTGTGGGGGTGCCATAGCCTGGTTCCCTCGTG
GGGCATGGGTGCCTGCTGTCGGGCCACCGCTTGATCCCAGCTGCCGCTAATACCATCCTT
GCTTGAGCCCCCTCCTTCCTCTCCCAGGACCTCCGCCTCCCACTGGCTGCTTCACGGTCT
CCTTGGATGAGCCCACCCTGGGCCCCTGGGAGGGACCCGGAGTCGGGGTCCCGAGTGGGG
CAGGTGTGAGGTGCTGTCCTCCTCCCACAGGCCTCTCCCTGGAACGCCTACCCAACTCGA
TCGCCTCCCGCCACCGCCTGACTGAGAGGGAGGAGGAAGTGATCACCTGTTTCGAGAGGG
CCTCCTGGATCGCTCAGGTGTTCCTGCAGGAATTGGAGAAGGTGAGCTGGGAATAACAGC
CCCGTGGTCACCGCTACCCTCTATGAAGCACCTGTATCCATGTGCCTTTGCCCCCCGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               364-549, - strand, RNAz p=0.713848

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               364-549, - strand, RNAz p=0.713848

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               106-698, gnl|bosTau2|chr12 (29062422-29061837)
               

               
               106-698, gnl|Hg17|chr2 (47111613-47113947)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               106-698, gnl|bosTau2|chr12 (29062422-29061837)
               

               
               106-698, gnl|Hg17|chr2 (47111613-47113947)

	106-698, gnl\|bosTau2\|chr12 (29062422-29061837)
	106-698, gnl\|Hg17\|chr2 (47111613-47113947)