Non-Coding RNA Search

Spl1-SPL01E020097

Sequence:


               
               AGTGCTGTCTCGGCCATGACACACATTTGACATGCCCTCCTTTAAACCGCTCAGAGACGG
TCTCTCTTGCCCTGCAGCATGGACCAAAGAGAAGTCCTACAGAAGTTCCTGGATGAGGCC
CAAAACAAGAAAAATAACAAAAAGGAGTTTGCCAGTGAATTTCTGGTAAGTCCTATATGT
GACCCGGTCGGGCTAGTGACATAGATGTTTAACTGCTTGCAATGGTCCAATTCTTTTAGA
CCAAATTGCTCTTGTGATCAAGTGCATATCAGACCTTTGGGGGAAGAAGGCATCCTAAAA
GTGTGACTTCTCTAAGTGGCGTGTGTGTCCTTCGGGTGTCCTCTACCATGCCTGATAGCT
TAGCTTTCTTAGCAAAACATAGTTTGGAATATTTTGTGTGCTAGTTCTTGGAGGTTGACT
GGGAATCCTCCAAAAGACCTGCATCATTCCAGGGGTACAAACCTAATATTCATTGAACAT
CTGGAGTTCCCAGGTATCTGAGTTCTAGGTTTATGTTTCAAAGGACTCATTTTCATGCAT
ATCAAGAGGAACCAGAGCAAGGTTCCCTTTTCATGGAGCATTACCCTTTTGGCCTCCTGT
GGGGTTCCATTTGGATGACAGAGGCTTTTGAAGAGCACCAAGCCACGTTTATTTTTTGTC
GTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTGCTGTCTCGGCCATGACACACATTTGACATGCCCTCCTTTAAACCGCTCAGAGACGG
TCTCTCTTGCCCTGCAGCATGGACCAAAGAGAAGTCCTACAGAAGTTCCTGGATGAGGCC
CAAAACAAGAAAAATAACAAAAAGGAGTTTGCCAGTGAATTTCTGGTAAGTCCTATATGT
GACCCGGTCGGGCTAGTGACATAGATGTTTAACTGCTTGCAATGGTCCAATTCTTTTAGA
CCAAATTGCTCTTGTGATCAAGTGCATATCAGACCTTTGGGGGAAGAAGGCATCCTAAAA
GTGTGACTTCTCTAAGTGGCGTGTGTGTCCTTCGGGTGTCCTCTACCATGCCTGATAGCT
TAGCTTTCTTAGCAAAACATAGTTTGGAATATTTTGTGTGCTAGTTCTTGGAGGTTGACT
GGGAATCCTCCAAAAGACCTGCATCATTCCAGGGGTACAAACCTAATATTCATTGAACAT
CTGGAGTTCCCAGGTATCTGAGTTCTAGGTTTATGTTTCAAAGGACTCATTTTCATGCAT
ATCAAGAGGAACCAGAGCAAGGTTCCCTTTTCATGGAGCATTACCCTTTTGGCCTCCTGT
GGGGTTCCATTTGGATGACAGAGGCTTTTGAAGAGCACCAAGCCACGTTTATTTTTTGTC
GTG

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               1-328, gnl|bosTau2|chr3 (24421046-24421368)
               

               
               1-328, gnl|Hg17|chr1 (114126365-114126036)
               

               
               1-328, gnl|Mm7|chr3 (103654316-103654641)
               


               
               373-639, gnl|bosTau2|chr3 (24421386-24421654)
               

               
               373-639, gnl|Hg17|chr1 (114126018-114125748)
               

               
               373-639, gnl|Mm7|chr3 (103654659-103654884)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-328, gnl|bosTau2|chr3 (24421046-24421368)
               

               
               1-328, gnl|Hg17|chr1 (114126365-114126036)
               

               
               1-328, gnl|Mm7|chr3 (103654316-103654641)
               


               
               373-639, gnl|bosTau2|chr3 (24421386-24421654)
               

               
               373-639, gnl|Hg17|chr1 (114126018-114125748)
               

               
               373-639, gnl|Mm7|chr3 (103654659-103654884)

	1-328, gnl\|bosTau2\|chr3 (24421046-24421368)
	1-328, gnl\|Hg17\|chr1 (114126365-114126036)
	1-328, gnl\|Mm7\|chr3 (103654316-103654641)

	373-639, gnl\|bosTau2\|chr3 (24421386-24421654)
	373-639, gnl\|Hg17\|chr1 (114126018-114125748)
	373-639, gnl\|Mm7\|chr3 (103654659-103654884)