Non-Coding RNA Search

Spl1-SPL01E120058

Sequence:


               
               TGTAATGCAGTGAGAACAGTGCCTGTCAGATAGCCCTTGAAGGTCTGATATTAGTTTATT
TCCTGTATACACATTAGAATACCCTTATCTCTTAAGGACATTTCCAGGATCTTCTGCTGA
TACTTAAATGAGGGGAGGCAGGATAAGCCCAGGACATAGAAGACCCTGGTTCAAATTCTG
ACTCAGCCACTTACTACCTTGTAAGTCATTTGAGTTCCATGCACCTGAGTTTCATCATCT
GTGATGAAATGGGACTAATAAGGCCCTTCTCACTAGTTGTTATAAGGATGAGTTGAGACC
ACAGGAATGCCAAAGTGCTTTGTGTATGAAGAACTGTAGATTTAATATTGGGACTTTGCT
ACTGAGACTTCTACTAGGTGAGTCTGATTACAGGCAGCAGAGGACAGAAGGAGGGAAGGA
CAAACTCTGCTGGAAAACACCTGGGGAAAGTCTAAGTGGGAGTCTGCTGTCTGACTTGGT
GCATTTAGTGGGTACAGGTGGACCAGGAATTTGCAGCTGCTGGTTCCTATGGTTGCCTGA
GTAGTGAGAGGTTCCAGGCAGGGCCTTGGAATTGGGGAAGGTAGGAGTGAAGGAAATATT
TATTTTCCTTTGCAGGAAGAGGCAGTTGAGTTTCTGTGATGGGCTCCTTTCTGGCCAAGT
CTTAGCAGAGGCTGCCAAGGAGCCAAATGCCATGCGGGGAAGGAGAGGCATCCAGGTGGC
CGTCGATGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTAATGCAGTGAGAACAGTGCCTGTCAGATAGCCCTTGAAGGTCTGATATTAGTTTATT
TCCTGTATACACATTAGAATACCCTTATCTCTTAAGGACATTTCCAGGATCTTCTGCTGA
TACTTAAATGAGGGGAGGCAGGATAAGCCCAGGACATAGAAGACCCTGGTTCAAATTCTG
ACTCAGCCACTTACTACCTTGTAAGTCATTTGAGTTCCATGCACCTGAGTTTCATCATCT
GTGATGAAATGGGACTAATAAGGCCCTTCTCACTAGTTGTTATAAGGATGAGTTGAGACC
ACAGGAATGCCAAAGTGCTTTGTGTATGAAGAACTGTAGATTTAATATTGGGACTTTGCT
ACTGAGACTTCTACTAGGTGAGTCTGATTACAGGCAGCAGAGGACAGAAGGAGGGAAGGA
CAAACTCTGCTGGAAAACACCTGGGGAAAGTCTAAGTGGGAGTCTGCTGTCTGACTTGGT
GCATTTAGTGGGTACAGGTGGACCAGGAATTTGCAGCTGCTGGTTCCTATGGTTGCCTGA
GTAGTGAGAGGTTCCAGGCAGGGCCTTGGAATTGGGGAAGGTAGGAGTGAAGGAAATATT
TATTTTCCTTTGCAGGAAGAGGCAGTTGAGTTTCTGTGATGGGCTCCTTTCTGGCCAAGT
CTTAGCAGAGGCTGCCAAGGAGCCAAATGCCATGCGGGGAAGGAGAGGCATCCAGGTGGC
CGTCGATGTC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               507-684, - strand, RNAz p=0.974437

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               507-684, - strand, RNAz p=0.974437

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               120-705, gnl|bosTau2|chr16 (44976905-44977481)
               

               
               120-705, gnl|Hg17|chr1 (172054273-172055154)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               120-705, gnl|bosTau2|chr16 (44976905-44977481)
               

               
               120-705, gnl|Hg17|chr1 (172054273-172055154)

	120-705, gnl\|bosTau2\|chr16 (44976905-44977481)
	120-705, gnl\|Hg17\|chr1 (172054273-172055154)