Non-Coding RNA Search

Spl1-SPL01F030102

Sequence:


               
               TTGTCATTGATTATCACCAGTCAGAGGACAGAGTGTTTTCATCAAAGGTGCTGCTTCATT
CCATAAACTAGCTTGTAAGTTAATGGAACTATTAGAAAGCTAGATTAGTACAGGGAGACA
TAATTGTAGTCCTTTCGGTTTTGTGTGGTGGAGCATAGTAGAATTTTGGCAAATGGTTGC
TAGGACTCTCTTTCAGGTTTTAAGTTTTTAATTTGGCCAACTTGCTGAGGCTCAGATTGA
GGGGTGACCCACTTTTGCATGGGTCGAAACAACCAGGGCATGGAAAAGACATTGTTTTTT
TTTTCCTTTGCAGGAAACTTTGCAAAGTTTCCCAGTGCACAAAATCTGTATTCCACATCT
GATACATAGAGAAGCTACGATTAGAAACATGGGTGTTTTAAAAACAAAATTTCCAACTTG
CGAAATTTTTTTTGAAAACTCTGTCTCAGGTGGTTCCTTCAGCTAAGTGAGCTACATAGC
ATGTCATTTGTTTACGGATACTTAATAAAGCGAAGAGCAGTATCCTGTTTTCTTTATCTG
GCATTTGACAGCTGTTAACTAGTGAAATGAGAGATTAGAGACTGTGCAACTAAAAGCATA
CAGCAGTAGATCCCTTCAAACAAAACCGTGTCACCTTCTATACAAAGTATTAAGTTAACC
CTCTGGCAAGATGTGTATGGTGTGCAGCTGAGAGAGTTGTGTTTTCCTAACAAGAGTTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGTCATTGATTATCACCAGTCAGAGGACAGAGTGTTTTCATCAAAGGTGCTGCTTCATT
CCATAAACTAGCTTGTAAGTTAATGGAACTATTAGAAAGCTAGATTAGTACAGGGAGACA
TAATTGTAGTCCTTTCGGTTTTGTGTGGTGGAGCATAGTAGAATTTTGGCAAATGGTTGC
TAGGACTCTCTTTCAGGTTTTAAGTTTTTAATTTGGCCAACTTGCTGAGGCTCAGATTGA
GGGGTGACCCACTTTTGCATGGGTCGAAACAACCAGGGCATGGAAAAGACATTGTTTTTT
TTTTCCTTTGCAGGAAACTTTGCAAAGTTTCCCAGTGCACAAAATCTGTATTCCACATCT
GATACATAGAGAAGCTACGATTAGAAACATGGGTGTTTTAAAAACAAAATTTCCAACTTG
CGAAATTTTTTTTGAAAACTCTGTCTCAGGTGGTTCCTTCAGCTAAGTGAGCTACATAGC
ATGTCATTTGTTTACGGATACTTAATAAAGCGAAGAGCAGTATCCTGTTTTCTTTATCTG
GCATTTGACAGCTGTTAACTAGTGAAATGAGAGATTAGAGACTGTGCAACTAAAAGCATA
CAGCAGTAGATCCCTTCAAACAAAACCGTGTCACCTTCTATACAAAGTATTAAGTTAACC
CTCTGGCAAGATGTGTATGGTGTGCAGCTGAGAGAGTTGTGTTTTCCTAACAAGAGTTCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               207-326, + strand, RNAz p=0.887759

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               207-326, + strand, RNAz p=0.887759

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               12-709, gnl|bosTau2|chr3 (54870381-54869685)
               

               
               12-709, gnl|Hg17|chr1 (64943888-64944582)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               12-709, gnl|bosTau2|chr3 (54870381-54869685)
               

               
               12-709, gnl|Hg17|chr1 (64943888-64944582)

	12-709, gnl\|bosTau2\|chr3 (54870381-54869685)
	12-709, gnl\|Hg17\|chr1 (64943888-64944582)