Spl1-SPL01F040052
|
TGTACTTGTGCTGTTTATGGGGCTTGTTGCGATCTGTGATAAGAATGCTTTCCTGGTTAC
TTAAGATGGGCTGTATCTATAAGTCCAGTGTATTCCCTTTTGTCAAATCTGGCTCTTCAT
GTTTTCTAAGTGATGGTAAATAGCAACTTTAGCACACATTAGGCTGCTCCTCTCTTGCAT
GTGTAGTGTAGTACAGCACTATCCAGTGGAAGTTTCTATGATGATGGAAATGTTTTCTAT
TTCTACTTGTTACCAGAAGGTTAACAAAtaggcactagccgcatgtggctactgtgcact
tgacatgtggttactgcatttgaggaactgatctttttcatcttttattttatttttggc
cacaaccacggcatgtggaagttcacgggccagggatcaaatctgagccacagctgcggc
aacgccggatccttaacctgctgttctgggccagggatcaaacccacgctgccacagaga
caagccagatccttaatccattgcaccacagggggaactccCATTTTACTTAATTTTAAA
TAACTTGACATTGCAGTAGCCATGTGTAGTAGTGGCTATCATAAGGGCCAGTGCAGGATC
ATACAGAATATTTAAAGGTGCAGTCCCCCTTTTTTTTGTATGGCTAAGAGAAGCTCGGTA
TTTAGAGTCATCGACACTAACGTTGACATTGTGGCTGCCTAGAGTTTTGGAGAGGCAGCT
CAGATCCGGGTAGTACTG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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TGTACTTGTGCTGTTTATGGGGCTTGTTGCGATCTGTGATAAGAATGCTTTCCTGGTTAC
TTAAGATGGGCTGTATCTATAAGTCCAGTGTATTCCCTTTTGTCAAATCTGGCTCTTCAT
GTTTTCTAAGTGATGGTAAATAGCAACTTTAGCACACATTAGGCTGCTCCTCTCTTGCAT
GTGTAGTGTAGTACAGCACTATCCAGTGGAAGTTTCTATGATGATGGAAATGTTTTCTAT
TTCTACTTGTTACCAGAAGGTTAACAAAtaggcactagccgcatgtggctactgtgcact
tgacatgtggttactgcatttgaggaactgatctttttcatcttttattttatttttggc
cacaaccacggcatgtggaagttcacgggccagggatcaaatctgagccacagctgcggc
aacgccggatccttaacctgctgttctgggccagggatcaaacccacgctgccacagaga
caagccagatccttaatccattgcaccacagggggaactccCATTTTACTTAATTTTAAA
TAACTTGACATTGCAGTAGCCATGTGTAGTAGTGGCTATCATAAGGGCCAGTGCAGGATC
ATACAGAATATTTAAAGGTGCAGTCCCCCTTTTTTTTGTATGGCTAAGAGAAGCTCGGTA
TTTAGAGTCATCGACACTAACGTTGACATTGTGGCTGCCTAGAGTTTTGGAGAGGCAGCT
CAGATCCGGGTAGTACTG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
22-356, gnl|bosTau2|chrX (19088505-19088819) |
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22-356, gnl|Hg17|chrX (109085993-109086295) |
| |
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522-738, gnl|bosTau2|chrX (19088804-19089012) |
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522-738, gnl|canFam2|chrX (86322153-86322310) |
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522-738, gnl|dasNov1|scaffold_53554 (2583-2427) |
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522-738, gnl|echTel1|scaffold_318998 (23739-23601) |
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522-738, gnl|hg17|chrX (109086259-109086411) |
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522-738, gnl|Hg17|chrX (109086281-109086484) |
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522-738, gnl|loxAfr1|scaffold_1011 (73457-73601) |
|
522-738, gnl|oryCun1|scaffold_206858 (54687-54533) |
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522-738, gnl|panTro1|chrX (112786200-112786352) |
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522-738, gnl|rheMac2|chrX (108752408-108752561) |
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522-738, gnl|rn3|chrX (35894595-35894477) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
22-356, gnl|bosTau2|chrX (19088505-19088819) |
|
22-356, gnl|Hg17|chrX (109085993-109086295) |
| |
|
522-738, gnl|bosTau2|chrX (19088804-19089012) |
|
522-738, gnl|canFam2|chrX (86322153-86322310) |
|
522-738, gnl|dasNov1|scaffold_53554 (2583-2427) |
|
522-738, gnl|echTel1|scaffold_318998 (23739-23601) |
|
522-738, gnl|hg17|chrX (109086259-109086411) |
|
522-738, gnl|Hg17|chrX (109086281-109086484) |
|
522-738, gnl|loxAfr1|scaffold_1011 (73457-73601) |
|
522-738, gnl|oryCun1|scaffold_206858 (54687-54533) |
|
522-738, gnl|panTro1|chrX (112786200-112786352) |
|
522-738, gnl|rheMac2|chrX (108752408-108752561) |
|
522-738, gnl|rn3|chrX (35894595-35894477) |
