Spl1-SPL01F100048
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GGACTGCTCTAGATGCTCCCCGGAACCTGGCCATCGGCATCTCTCGAGGAAATTGCACAG
AGCTGAAATACCTGGGGAATGGCTCATCTCTTCCTGTCCTGGAAGGGGAATCTCTGTGCC
TGGTCTGCGTCGTTGACAGCACCCCCCCGGCCACACTGAGCTGGGCCCGACGGGGCCGGA
CCCTGAGCCCCTCGCAGCCCTGGAACCCCGGGGTCCTGCAGCTGCCCCAGGTGGAGTCGG
GCCACGAAGACCCCCCGAAGCTGCTGGGTCCCTTCTGCTCCTGGGAGGATGAGGGTCTGC
ACTGCAGCTGCTCCTCCCAAGCTCAGCCCGCCCTCTCCCGGCGCTGGCGGCTGGGGGAGA
GACCTGGACCGGAATCTCAGCAACGCCTCCATCAAGGTCACCTCTGGCTCCACCGGGGCC
CTGGGCCAACAGCTCCCTGAGCTTCCGCGAGGGCCTCAGCTCCAGCCTCAGACTCAGCTT
CGAGGCCCAGAACGTCCACGGGGCCCAGAGCACCACTGTCCTGCTGCTGCCAGGGAAGCC
CAGGGTTGGAGGAGGATTGGTTCTGGGGGCCGTCGGGGGAGCTGGCATTGCTGGCCTGCT
CAGTCTCTGTTCCTGCCTCATCTTCTTCATGGTTACCAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGACTGCTCTAGATGCTCCCCGGAACCTGGCCATCGGCATCTCTCGAGGAAATTGCACAG
AGCTGAAATACCTGGGGAATGGCTCATCTCTTCCTGTCCTGGAAGGGGAATCTCTGTGCC
TGGTCTGCGTCGTTGACAGCACCCCCCCGGCCACACTGAGCTGGGCCCGACGGGGCCGGA
CCCTGAGCCCCTCGCAGCCCTGGAACCCCGGGGTCCTGCAGCTGCCCCAGGTGGAGTCGG
GCCACGAAGACCCCCCGAAGCTGCTGGGTCCCTTCTGCTCCTGGGAGGATGAGGGTCTGC
ACTGCAGCTGCTCCTCCCAAGCTCAGCCCGCCCTCTCCCGGCGCTGGCGGCTGGGGGAGA
GACCTGGACCGGAATCTCAGCAACGCCTCCATCAAGGTCACCTCTGGCTCCACCGGGGCC
CTGGGCCAACAGCTCCCTGAGCTTCCGCGAGGGCCTCAGCTCCAGCCTCAGACTCAGCTT
CGAGGCCCAGAACGTCCACGGGGCCCAGAGCACCACTGTCCTGCTGCTGCCAGGGAAGCC
CAGGGTTGGAGGAGGATTGGTTCTGGGGGCCGTCGGGGGAGCTGGCATTGCTGGCCTGCT
CAGTCTCTGTTCCTGCCTCATCTTCTTCATGGTTACCAG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
305-368, + strand, RNAmicro p=0.944852 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
305-368, + strand, RNAmicro p=0.944852 |
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248-534, gnl|bosTau2|chr18 (50816633-50816346) |
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248-534, gnl|canFam2|chr1 (108414270-108413620) |
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248-534, gnl|dasNov1|scaffold_64092 (4908-5523) |
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248-534, gnl|echTel1|scaffold_183081 (5940-5285) |
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248-534, gnl|hg17|chr19 (56724423-56725070) |
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248-534, gnl|Hg17|chr19 (56724691-56724429) |
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248-534, gnl|loxAfr1|scaffold_10184 (57026-57704) |
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248-534, gnl|mm7|chr7 (39531190-39530529) |
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248-534, gnl|Mm7|chr7 (39530895-39531182) |
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248-534, gnl|monDom2|scaffold_212 (115624-114923) |
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248-534, gnl|oryCun1|scaffold_102686 (3575-2899) |
|
248-534, gnl|panTro1|chr20 (54151701-54152348) |
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248-534, gnl|rheMac2|chr19 (57613569-57614214) |
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248-534, gnl|rn3|chr1 (93817549-93816888) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
248-534, gnl|bosTau2|chr18 (50816633-50816346) |
|
248-534, gnl|canFam2|chr1 (108414270-108413620) |
|
248-534, gnl|dasNov1|scaffold_64092 (4908-5523) |
|
248-534, gnl|echTel1|scaffold_183081 (5940-5285) |
|
248-534, gnl|hg17|chr19 (56724423-56725070) |
|
248-534, gnl|Hg17|chr19 (56724691-56724429) |
|
248-534, gnl|loxAfr1|scaffold_10184 (57026-57704) |
|
248-534, gnl|mm7|chr7 (39531190-39530529) |
|
248-534, gnl|Mm7|chr7 (39530895-39531182) |
|
248-534, gnl|monDom2|scaffold_212 (115624-114923) |
|
248-534, gnl|oryCun1|scaffold_102686 (3575-2899) |
|
248-534, gnl|panTro1|chr20 (54151701-54152348) |
|
248-534, gnl|rheMac2|chr19 (57613569-57614214) |
|
248-534, gnl|rn3|chr1 (93817549-93816888) |
